nhotaling / diameterj Goto Github PK

//Gets number of Medial Analysis intersections and lengths between intersections					
			run("Analyze Skeleton (2D/3D)", "prune=[shortest branch] show");
			selectWindow("Results");
				run("Close");

				
	selectWindow("Branch information");
				saveAs("Results",path1);
				run("Close");
				
	open(path1);
		if(batch_combo == "Yes"){
			saveAs("Results", path16);
		}
		run("Summarize");
			Char_Length_Mean = getResult("Branch length",nResults-4); <-- This seems to be out of range
			Char_Length_SD = getResult("Branch length",nResults-3);
			Char_Length_Max = getResult("Branch length",nResults-1);
		saveAs("Results",path1);
			selectWindow("Results");
				run("Close");	

	var path0 = <myDir> + name [ 0 ] ;