Comments (1)
We'd like to expand CI tests to Python versions 3.8 and 3.9. However, we had to remove 3.9 from CI tests due to TensorFlow und Keras dependency restrictions that are not available for Python > 3.8.
This is fixed by BolognaBiocomp/deepsig#30
from bakta.
Related Issues (20)
- pyrodigal issues with fresh 1.8.2 conda install HOT 5
- produce the --replicons input content based on the flye assembly_info.txt HOT 3
- Something wrong with bakta_db download HOT 3
- bakta is renaming input contigs in its outputs HOT 4
- MacOS M2 cannot install bakta using conda. HOT 1
- Bakta fails using --regions if a sequence does not contain a valid start codon HOT 3
- %2C instead of common in GFF3 files HOT 4
- Failed bakta run for some genomes HOT 8
- origin of replication detection not match Ori-Finder web server HOT 1
- Option to Skip the AMR detection step HOT 5
- Exception: diamond error! error code: -11 HOT 6
- Bakta Diamond error HOT 4
- DeepSig could not be executed! Please make sure DeepSig is installed and executable HOT 5
- Bakta neither generated circular genome plots nor error messages for running circos command HOT 5
- 'SQL error!', IndexError('tuple index out of range') HOT 7
- CRISPR position doesn't include last spacer
- circos legend HOT 1
- Reduce locus_tag offset from 5 to 1
- Color coding in bakta_plot --type cog HOT 2
- Inquiry about the coding density equation HOT 4
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from bakta.