Comments (1)
We'd like to expand CI tests to Python versions 3.8 and 3.9. However, we had to remove 3.9 from CI tests due to TensorFlow und Keras dependency restrictions that are not available for Python > 3.8.
This is fixed by BolognaBiocomp/deepsig#30
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Related Issues (20)
- tRNAscan-SE slow with multiple threads HOT 3
- PSC failed! diamond-error-code=-11 HOT 2
- Bakta Web Does Not Work HOT 6
- Diamond Error -9 HOT 3
- Is there a way to deactivate the overlap detection so bakta does not filter my input proteins? HOT 3
- Inquiry on CDS annotation HOT 2
- pyhmmer not found HOT 14
- pyrodigal has no attribute 'OrfFinder' HOT 11
- CRISPR prediction assertion error HOT 1
- (Re-)Generating bakta outputs from the JSON only
- Bakta web version ignores translation table change HOT 1
- reproducibility - amrfinderplus-db HOT 4
- Issue with trnascan-SE and bakta v1.9.4 HOT 1
- Addition of custom codon table/improve 'rare' start codons prediction HOT 2
- Option for trusted HMMs
- .conda/envs/bakta/lib/python3.10/site-packages/bakta/main.py", line 150, in main genome['features'][bc.FEATURE_T_RNA] = t_rna.predict_t_rnas(genome, contigs_path) HOT 1
- tRNAscan-SE issue on HPC HOT 1
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