Name: Philip W Fowler
Type: User
Bio: Computational biophysicist working on antibiotic resistance. Run @fowler-lab and working on @GlobalPathogenAnalysisService .
Twitter: philipwfowler
Location: University of Oxford, Oxford, OX3 9DU, U.K.
Blog: http://fowlerlab.org
Philip W Fowler's Projects
Software Carpentry Bootcamp at the Wellcome Trust Centre for Human Genetics in Oxford
Software Carpentry workshop at the Forschungzentrum, Jülich, 12-13 October 2015
An ALCHEMBED tutorial
Short python script showing how image processing techniques have been applied to simulations of phase-separating lipids. See the Faraday Discussion paper, http://dx.doi.org/10.1039/c3fd00131h
Genbank Mutation Locator: give it a mutation and it will tell you the location in the reference genome (and vice versa)
Simple python package for creating scripts to benchmark GROMACS
Simple python for adding jitter to a list of values to help plotting beeswarm/jitter plots
k-mer fishing in a GenBank reference
MDAnalysis is a Python library to analyze molecular dynamics trajectories.
a Python class to interrogate BIGISI
This is a short tutorial showing how to use both VMD and MDAnalysis to analyse a molecular dynamics simulation of a membrane protein.
Whole-genome SNP based identification of members of the Mycobacterium tuberculosis complex
Simply Python class for creating FASTA files from incremental VCF files