planteome / co_330-potato-traits Goto Github PK
View Code? Open in Web Editor NEWPotato trait ontology
Home Page: https://cropontology.org/term/CO_324:ROOT
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TO ID that exist in to.obo
While working on something for @jaiswalp, I noticed a reference to TO:1000075 on Line 2937 that doesn't appear to have a corresponding term in to.obo.
Create: test
Submitter
| Name | test |
| Program | test |
Creation Request
| Trait Name | test |
| Proposed Synonyms | test |
| Definition | test |
| Trait Class | Physiological |
| Measurement Method | test |
| Measurement Type | Categorical |
Categories
| ID | Description |
|---|---|
| test | test |
| test2 | test2 |
Create: Test
Submitter
| Name | Naama |
| Program | BTI |
Creation Request
| Trait Name | Test |
| Proposed Synonyms | test 123 |
| Definition | test |
| Trait Class | Abiotic Stress |
| Measurement Method | visual |
| Measurement Type | Unit |
| Measurement Unit | kg |
ERROR Weight/yield
Hello,
I noticed that the term ''weight'' is used for the variables below, whereas ''Yield'' should be used. A weight is a mass. A yield is a mass per unit area.
- CO_330:0000306
- CO_330:0000312
- CO_330:0000315
Therefore, the ''weight'' variables are missing from the ontology. Would it be possible to add:
- Tuber weight
- Non marketable tuber weight
- Marketable tuber weight
- Non marketable tuber dry weight
- Marketable tuber dry weight
- Non marketable tuber fresh weight
- Marketable tuber fresh weight
Unit: kg
Definition: Mass of the tubers
Thank you.
Create: test
Submitter
| Name | Hajira Jabeen |
| Program | University of Cologne |
Creation Request
| Trait Name | test |
| Proposed Synonyms | testing |
| Definition | testing the submisison |
| Trait Class | Quality |
| Measurement Method | 'testing' |
| Measurement Type | Unit |
| Measurement Unit | Kg |
Duplicated crop name in 6 traits
There are six traits where the crop name is duplicated- should create a post-mapping QC check for this?
Update the unit for the trait Number of emerged plants
Hi @vhualla,
I am using the potato TD and wonder if the unit for the trait Number of emerged plants (line 43) should be plant/plot instead of the current tuber/plot?
Best,
Céline
add variable name and description for all variables
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