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agct

Array Genotyping Conversion Tool

ansible

Ansible is a radically simple IT automation platform that makes your applications and systems easier to deploy. Avoid writing scripts or custom code to deploy and update your applications— automate in a language that approaches plain English, using SSH, with no agents to install on remote systems.

ansible-pipelines

ansible.posix

Ansible Collection for Posix

bioinformaticaveldnorm

Fieldnorm for Bioinformatics within Medical Laboratories

cluster-utils

Collection of utilities / helper scripts to make life easier on our HPC clusters.

concordancecheck

depad-utils

Utilities for deploy admins

docker

Docker image for Molgenis

easy_update

Update EasyBuild package configuration files for R and Python bundles

easybuild-easyblocks

Collection of easyblocks that implement support for building and installing software with EasyBuild.

easybuild-easyconfigs

A collection of easyconfig files that describe which software to build using which build options with EasyBuild.

easybuild-framework

EasyBuild is a software installation framework in Python that allows you to install software in a structured and robust way.

easybuild.experimental

This repository is for easybuild open source contributions without restrictions - add your username under the /users directory

ega-fuse-client

A Java/JNR based FUSE virtual file system client to provide access to authorized EGA files via the EGA Data REST API (v3)

gap

Genotyping Array Pipeline

league-of-robots

Code and configs for deploying (virtual) HPC clusters.

lmod

Lmod: An Environment Module System based on Lua, Reads TCL Modules, Supports a Software Hierarchy

mitoseek

Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing

molgenis

MOLGENIS is an collaborative open source project on a mission to generate great software infrastructure for life science research.

molgenis-compute

MOLGENIS Compute is a framework for bioinformatics which enables large scale data and computational workflow management in a distributed execution environment.

molgenis-legacy

The MOLGENIS Software generator tool for creating Dynamic Software Infrastructure used in the Life Sciences

molgenis-pipelines

Pipelines for NGS, imputation, gwas, ...

molgenis-solve-rd

All things related to maintaining the RD3 database

molgenis_apps-legacy

MOLGENIS Advanced Application and Computation Framework for the Life Sciences

mutationinfo

Tool to retrieve meta-information of genetic variants

ngs-utils

Collection of notes and scripts related to NGS

ngs_automated

ngs_demultiplexing

ngs_dna