Error "failed to link 'man/ja'" when installing specific build of openjdk about pixi

[ruben-arts]

Thanks for the reproducer! This is broken for me to.

Looking at the download counts it should be possible to install the package.

It looks like this has something to do with a symlinked file in the package itself.

> ls -l openjdk-11.0.1/man
lrwxrwxrwx 1 rarts rarts  11 30 apr 22:08 ja -> ja_JP.UTF-8
drwxr-xr-x 1 rarts rarts   8 30 apr 22:08 ja_JP.UTF-8
drwxr-xr-x 1 rarts rarts 392 30 apr 22:08 man1

@baszalmstra Should we be supporting this? The current download count on conda-forge is 424k so it is at least a widely used package, so I guess the other tools accept or avoid it in some way. The surrounding packages also contain this symlink.

[davised]

For what it's worth, I'm getting this error with another package as well.

  × failed to instantiate a prefix for 'default'
  ├─▶ failed to link 'lib/libreadline.so'
  ├─▶ could not open destination file for writing
  ╰─▶ No such file or directory (os error 2)

I'm not sure exactly which one it is, but I see a link:

$ ls .pixi/envs/default/lib -l
drwxr-xr-x davised cqls   14 B  Thu May  2 10:46:47 2024  engines
lrwxrwxrwx davised cqls   18 B  Thu May  2 10:46:33 2024  libatomic.so ⇒ libatomic.so.1.2.0
lrwxrwxrwx davised cqls   18 B  Thu May  2 10:46:47 2024  libatomic.so.1 ⇒ libatomic.so.1.2.0
.rw-r--r-- davised cqls    0 B  Mon May 18 05:11:59 1987  libatomic.so.1.2.0
.rw-rw-r-- davised cqls  5.1 MB Thu May  2 10:46:47 2024  libcrypto.a
lrwxrwxrwx davised cqls   18 B  Thu May  2 10:46:47 2024  libcrypto.so ⇒ libcrypto.so.1.0.0
.rwxrwxr-x davised cqls  2.5 MB Thu May  2 10:46:47 2024  libcrypto.so.1.0.0
.rw-r--r-- davised cqls    0 B  Sun May 17 17:32:38 1987  libffi.a
lrwxrwxrwx davised cqls   15 B  Thu May  2 10:46:47 2024  libffi.so ⇒ libffi.so.8.1.0
lrwxrwxrwx davised cqls   15 B  Thu May  2 10:46:05 2024  libffi.so.8 ⇒ libffi.so.8.1.0
.rw-r--r-- davised cqls    0 B  Sun May 17 17:32:38 1987  libffi.so.8.1.0
.rw-r--r-- davised cqls    0 B  Mon May 18 05:11:59 1987  libgcc_s.so.1
lrwxrwxrwx davised cqls   16 B  Thu May  2 10:46:05 2024  libgomp.so ⇒ libgomp.so.1.0.0
.rwxrwxr-x davised cqls  1.0 MB Wed May  1 09:41:39 2024  libgomp.so.1.0.0
.rw-r--r-- davised cqls  181 KB Thu May 19 10:33:18 2016  libhistory.a
lrwxrwxrwx davised cqls   17 B  Thu May  2 10:46:47 2024  libhistory.so ⇒ libhistory.so.6.2
lrwxrwxrwx davised cqls   17 B  Thu May  2 10:46:47 2024  libhistory.so.6 ⇒ libhistory.so.6.2
.rw-r--r-- davised cqls    0 B  Thu May  2 10:46:47 2024  libhistory.so.6.2
lrwxrwxrwx davised cqls   15 B  Thu May  2 10:46:33 2024  libitm.so ⇒ libitm.so.1.0.0
lrwxrwxrwx davised cqls   15 B  Thu May  2 10:46:33 2024  libitm.so.1 ⇒ libitm.so.1.0.0
.rw-r--r-- davised cqls    0 B  Mon May 18 05:11:59 1987  libitm.so.1.0.0
lrwxrwxrwx davised cqls   16 B  Thu May  2 10:46:47 2024  liblzma.so ⇒ liblzma.so.5.2.6
lrwxrwxrwx davised cqls   16 B  Thu May  2 10:46:47 2024  liblzma.so.5 ⇒ liblzma.so.5.2.6
.rw-r--r-- davised cqls    0 B  Thu May  2 10:46:47 2024  liblzma.so.5.2.6
lrwxrwxrwx davised cqls   20 B  Thu May  2 10:46:33 2024  libquadmath.so ⇒ libquadmath.so.0.0.0
lrwxrwxrwx davised cqls   20 B  Thu May  2 10:46:47 2024  libquadmath.so.0 ⇒ libquadmath.so.0.0.0
.rw-r--r-- davised cqls    0 B  Mon May 18 05:11:59 1987  libquadmath.so.0.0.0
.rw-r--r-- davised cqls  1.2 MB Thu May 19 10:33:18 2016  libreadline.a
lrwxrwxrwx davised cqls   18 B  Thu May  2 10:46:47 2024  libreadline.so ⇒ libreadline.so.6.2
lrwxrwxrwx davised cqls   18 B  Thu May  2 10:46:47 2024  libreadline.so.6 ⇒ libreadline.so.6.2
.rw-r--r-- davised cqls    0 B  Thu May  2 10:46:47 2024  libreadline.so.6.2
.rw-r--r-- davised cqls  9.3 MB Wed Jun  8 08:15:34 2016  libsqlite3.a
.rwxr-xr-x davised cqls 1022 B  Thu May  2 10:46:33 2024  libsqlite3.la
lrwxrwxrwx davised cqls   19 B  Thu May  2 10:46:33 2024  libsqlite3.so ⇒ libsqlite3.so.0.8.6
lrwxrwxrwx davised cqls   19 B  Thu May  2 10:46:47 2024  libsqlite3.so.0 ⇒ libsqlite3.so.0.8.6
.rwxr-xr-x davised cqls  3.8 MB Wed Jun  8 08:15:35 2016  libsqlite3.so.0.8.6
.rw-r--r-- davised cqls    0 B  Thu May  2 10:46:47 2024  libssl.a
lrwxrwxrwx davised cqls   15 B  Thu May  2 10:46:47 2024  libssl.so ⇒ libssl.so.1.0.0
.rwxrwxr-x davised cqls  533 KB Thu May  2 10:46:47 2024  libssl.so.1.0.0
.rw-r--r-- davised cqls    0 B  Thu May  2 10:46:47 2024  libtcl8.5.so
.rw-r--r-- davised cqls    0 B  Thu May  2 10:46:47 2024  libtclstub8.5.a
.rw-r--r-- davised cqls    0 B  Thu May  2 10:46:47 2024  libtk8.5.so
.rw-r--r-- davised cqls    0 B  Mon May 18 05:11:58 1987  libz.a
lrwxrwxrwx davised cqls   14 B  Thu May  2 10:46:47 2024  libz.so ⇒ libz.so.1.2.13
lrwxrwxrwx davised cqls   14 B  Thu May  2 10:46:47 2024  libz.so.1 ⇒ libz.so.1.2.13
.rw-r--r-- davised cqls    0 B  Mon May 18 05:12:02 1987  libz.so.1.2.13
drwxr-xr-x davised cqls   11 B  Thu May  2 10:46:47 2024  pkgconfig
drwxr-xr-x davised cqls    3 B  Thu May  2 10:46:05 2024  python3.6
drwxr-xr-x davised cqls    5 B  Thu May  2 10:46:47 2024  tcl8.5

I'm guessing this is potentially an issue that will be popping up as more folks adopt this software.

[aochagavia]

For reference, I think I found the root cause (see conda/rattler#642).

[maawoo]

Ran into this issue today after upgrading pixi from 0.19.1 to 0.20.1.