qijunbo / dockercloud

a docker project

部署指南

文件清单

File Name	Description	备注
cloud	已废弃	[ReadMe](cloud/README.md)
conf	已废弃	[ReadMe](conf/README.md)
docker	自动部署脚本	[ReadMe](docker/README.md)
env	Lims Cloud 部署脚本	[ReadMe](env/README.md)
image	图片资源.
lims	Lims产品创建脚本.	[ReadMe](lims/README.md)
LIMS产品容器化方案.md		[查看](LIMS产品容器化方案.md)
LIMS产品容器化方案.pdf
mylims	开发环境容器创建脚本, 已废弃.	[ReadMe](mylims/README.md)
mysql	Mysql 初始化指南, 已废弃	[ReadMe](mysql/README.md)
三维天地云平台系统.png
部署指南.pdf

接口文档

http://192.168.1.30:8001/

填入: http://118.190.153.23/limscloud/v2/api-docs

MySQL Docker 容器初始化

https://github.com/docker-library/mysql/blob/7a850980c4b0d5fb5553986d280ebfb43230a6bb/8.0/Dockerfile

https://github.com/mysql/mysql-docker

mkdir -p  /root/data/mysql

docker run --name mysql -e MYSQL_ROOT_PASSWORD=sunway123# -d -p 3306:3306 -v /root/data/mysql:/var/lib/mysql mysql
 
docker container exec -it mysql bash

mysql -u root -p 
密码： sunway123#

Then you can start to use the db.

[Optional] Container customization

create folders tobe binded with container

mkdir -p  /root/mysql/user1/data
mkdir -p  /root/mysql/user1/initsql
mkdir -p  /root/mysql/user1/conf

Running custom init scripts at database creation

copy your create_db.sql into folder /docker-entrypoint-initdb.d, the sql script will be executed on container start.

docker run --name mysql -e MYSQL_ROOT_PASSWORD=sunway123# -d -p 3306:3306 \
	-v /root/mysql/user1/data:/var/lib/mysql  \
	-v /root/mysql/user1/initsql:/docker-entrypoint-initdb.d \
	-v /root/mysql/user1/conf:/etc/mysql/conf.d    mysql
 
docker container exec -it mysql bash

mysql -u root -p 
密码： sunway123#

chek environment variables

mysqladmin -u root -p variables  | grep  "case"

DB Initialization

Create DB

mysqladmin -u root -p  --default-character-set=utf8  create dbs_dev
mysql -u root -p --default-character-set=utf8 -D dbs_dev </var/lib/mysql/dbs_dev.sql

or

mysql -u root -p --default-character-set=utf8
CREATE DATABASE IF NOT EXISTS dbs_dev DEFAULT CHARSET utf8 COLLATE utf8_general_ci;
use dbs_dev;
source /var/lib/mysql/dbs_dev.sql

Tomcat Docker 容器初始化

https://github.com/docker-library/tomcat/blob/64166c6cb450e6701d7b493d1d296c6c1c972a1e/8.5/jre8/Dockerfile

docker container run --name tomcat -d -p 8080:8080 tomcat

docker exec -it tomcat bash

http://192.168.1.30:8080

创建LIMS生产环境镜像

特别说明：

生成环境容器启动即可，里面已经包含LIMS:

1. 启动lims：

    docker container run --name lims -d -p 8080:8080 sunway/lims:1 		 
   

2. 访问： http://192.168.1.30:8080/iframework

Create Dockerfile for Pruduction Environment

#Create a LIMS image based on tomcat8
FROM tomcat:latest
COPY  iframework /usr/local/iframework
COPY  server.xml /usr/local/tomcat/conf/server.xml

Build Docker Image

docker image rm sunway/lims:1	
docker image build -t sunway/lims:1  . 

Start Container for LIMS

docker container run --name lims -d -p 8080:8080 sunway/lims:1  

Look inside the container.

docker exec -it lims bash

Done, Click here to access lims system.

http://192.168.1.30:8080/iframework

rebuild.sh

docker container stop lims
docker container prune -f
docker image rm sunway/lims:1
docker image build -t sunway/lims:1  .

restart.sh

docker container stop lims
docker container rm lims
docker container prune -f
docker container run --name lims -d -p 8080:8080 sunway/lims:1

创建开发专用Tomcat容器

特别说明:

开发版容器使用步骤如下:
1. 把LIMS复制到：/home/docker/mylims/iframework
2. 启动定制化的tomcat容器。
	docker container run --name mylims -d -P \
	-v /home/docker/mylims/logs:/usr/local/tomcat/logs \
	-v /home/docker/mylims/iframework:/usr/local/iframework sunway/mylims 	
3. 到这个目录查看日志： 
	/home/docker/mylims/logs
4. 查看运行在哪个端口：  
	docker port mylims

Create Dockerfile for Development Environment

# Setup a tomcat 8 as a development environment.
FROM tomcat:latest
VOLUME  /usr/local/iframework  /usr/local/tomcat/logs 
COPY  server.xml /usr/local/tomcat/conf/server.xml

Build Customized Tomcat Docker Image

docker image rm sunway/mylims
docker image build -t sunway/mylims  . 

Start customized Tomcat container.

mkdir -p  /home/docker/mylims/logs
docker container run --name mylims -d -P \
-v /home/docker/mylims/logs:/usr/local/tomcat/logs \
-v /home/docker/mylims/iframework:/usr/local/iframework sunway/mylims 

docker exec -it mylims bash
http://192.168.1.30:<port>/iframework

rebuild.sh

docker container stop mylims
docker container prune -f
docker image rm sunway/mylims
docker image build -t sunway/mylims  .

restart.sh

docker container stop mylims
docker container rm mylims
docker container prune -f
docker container run --name mylims -d -P \
		-v /home/docker/mylims/logs:/usr/local/tomcat/logs \
		-v /home/docker/mylims/iframework:/usr/local/iframework sunway/mylims
docker port mylims

drop database

docker exec -it mysql mysql -uroot -psunway123#

drop database lims_cloud ;
CREATE DATABASE IF NOT EXISTS lims_cloud DEFAULT CHARSET utf8 COLLATE utf8_general_ci;


/home/docker/env/deploycloud.war.sh


docker restart limsqijunbo1  && docker attach  limsqijunbo1

docker exec -it  limsqijunbo1 bash

Host is not allowed to connect to this MySQL server

Refer to this link You can check this with:

SELECT host FROM mysql.user WHERE User = 'root'; 

If you only see results with localhost and 127.0.0.1, you cannot connect from an external source. If you see other IP addresses, but not the one you're connecting from - that's also an indication.