quanted / hem_app

django app for the human exposure model

hem_app

django app for the human exposure model

hem_app's Issues

mock files for HEM database - chemical properties

PopGen - Add Chemicals

Use mockup to create page for adding chemicals

PopGen - Add Product Categories

Use mockup to create page for product category selection.

edits to HEM interface mock-ups - future download options

For future (may not need to do this for Sept 2017 deliverable), set up a way for user to access very large output files after model run (e.g., some sort of FTP type option, for when files are too large to download via web page)

edits to HEM interface mock-ups - toggle for type of composition data

When/if a user selects a product category, user should have the option to toggle whether they want to use 'prediction weight fraction' or 'reported/MSDS weight fraction' data, or both

Design Database

Use mock files from Kathie to design a dev db.

PopHouse output file (person table)

full first version of file for uploading into database

post final popgen code to GitHub page

So that code can be linked on the HEM GUI output page.

add member to quanted group

Please add PPrice52 (Paul Price, LC-HEM Project Lead) to the quanted group so that he can add issues and 'to do's' to the project.

PUC definitions file

full first version of file for uploading into database

Mockups for front end prototype

PopGen - Review Page

Use mockup to create a review page.

Use anaconda to install latest version of python 2.*

Here are the docs to do this

https://conda.io/docs/py2or3.html

Query: select by PUC

As Dave
I need 4 separate query results when user selects by single PUC
So that Dave can create the 4 results files and tables to be available to user

Acceptance criteria: Written SQL statements (4) + example .txt with correct results

Dose file

First full version of file for uploading into HEM database

Product composition file

First full version of file to upload into HEM database

Product categories

List of product categories (PUCs) for use in input GUI (i.e., user will be able to select PUCs of interest from this list). See 'PUCs' worksheet, columns L/M/N/P. Note PUCs are organized in a 4 tier hierarchy. User will be able to select at levels 1-3 (general category, group, product type) of the hierarchy (but user is not required to select up to tier 3). Also user will have option of including/excluding on level of 'assignment' (column Q, article/formulation/food contact/over the counter pharmaceutical). User should have the option to view definitions of each product category (column Q, 'description').

List of PUCs can be found in 'Data files' folder on GitHub repository

edits to HEM interface mock-ups - all chemicals/all products

Add option for user to select 'all chemicals' or 'all products'

PopGen - Select Region

Use mockup to develop select region page

list of PUCs

Django Training

It would be helpful to run through the docs on building a django app. I would work on this before attempting work on the hem codebase

mock files for HEM database - product composition

Use anaconda to install git

example data files for HEM database

Prepare example files for all data that will need to be stored in the HEM database

Ever Never rules file

Full first version of file for uploading into database

post HEM model code on GitHub page

So that code can be linked to on HEM GUI output page for full transparency of how final output numbers were calculated.

list of states and regions

Human Behavior Output file

Full first version of file for uploading into HEM database

edits to HEM interface mock-ups-race/ethnicity

Remove option for user to select on race and ethnicity

Install Anaconda

• anaconda – is a data science package management system (and more)

PopGen - Select Population

Use mockup to develop page to select population.

model for PhysChem properties

Habits and Practices file

full first version of file for uploading into database

mock files for HEM database - population/residential

mock files for HEM database - run parameters

Git Training

If you are not already familiar, take a look at the git docs and/or a tutorial like Try Git

password protected option for public version of HEM

at this point, public version of HEM should be password protected

testing dataset for popgen output. 50,000 would be sufficient.

Bootstrap

https://getbootstrap.com

As a developer
I want to get familiar with the Twitter Bootstrap framework
So that I can use the standard bootstrap tools in this project

Acceptance Criteria: The developer has read the documentation and is familiar with the framework and its use in this project.

mock files for HEM database - human behavior

PhysChem Properties file

Full first version of file for uploading into database

mock files for HEM database - overview of data files needed

post final ABM/Human Behavior module code to GitHub page

So that code can be linked to on the HEM GUI output page, for full transparency of how final outputs were calculated.

mock files for HEM database - PUCs

mock files for HEM database - ever/never rules

link HEM code on GitHub to GUI output page

somewhere on GUI output page, include a button linking the user over to all of the HEM code available on GitHub. This is so that there is full transparency of the model - a user can access all code to see the algorithms used to generate the outputs. This is also to satisfy the CSS requirement that everything we do be made public.

mock files for HEM database - habits and practices

mock files for HEM database - dose

PopGen - Results Page

Use mockup to create the results page.

Accessibility of intranet launch/version of HEM via remote VPN

i.e., ability to access an intranet accessible version of HEM via a remote VPN connection, for example, when wanting to demo an intranet accessible version of the model at a conference