sachahu1 / rosetta

Rosetta Quality Estimation

This project was developed by Ludo Mitchener (ludomitch), Alvaro Part (alvaroprat97), and Sacha Hu (me)

Requirements

This project requires Python v3.6.x and pip3 to run.

Setup

Requirements:

• Python 3
• pip3
• Java 6.0+

1. Install dependencies

Dependency management is done through pip.

pip3 install -r requirements.txt

Command line interface

Rosetta.

Usage:
  rosetta.py <mode> <save>

Options:
  -h --help     Show this screen.

Available Scripts

From the root directory, you can run:

python3 -m rosetta <mode> <save> to run the rosetta training pipeline. <mode> accepts the values 'no-extract' or 'extract' and decides respectively whether to load pre-generated features saved in the /saved_features directory or whether to extract the features from scratch. <save> accepts 'T' of 'F'. T for if you want to save the model as model.pt and F if you do not want to save the model generated.

python3 -m evolution to run the evolutionary manager pipeline. No options are required as all config options are hard-coded into the python file.