saiarvind1997 / cnn-microscopy-resnet

pretrained_microscopy_models

Software tools to build deep learning microscopy segmentation and analysis models with less training data. Pretrained MicroNet encoders are available for download. Leverages transfer learning from classification models trained on a large (>100,000 images) dataset of microscopy images.

Dataset

References explaining about the Dataset : https://www.nature.com/articles/sdata2018172 The dataset can be downloaded from here : https://b2share.eudat.eu/records/80df8606fcdb4b2bae1656f0dc6db8ba

main.py

Run main.py for training the custom CNN model for the image classification Run pretrained_model.py to load pre-trained Resnet model and finetune for the respective task.