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Sam Nicholls's Projects

domjudge icon domjudge

DOMjudge programming contest jury system

doot icon doot

b͡e̶hòld t̷h͝e̴ s̶ke̡l͜tal͞ of ke̢rn̕e͢l! ̵this iş 2 ̢spo̸opy ͞4̶ ̴man̡y

dotfiles icon dotfiles

Things that I need on my adventures against the computers

dotfiles-2.0 icon dotfiles-2.0

Things I need on my adventures against computers, deployed in a better way than last time

ebame18 icon ebame18

Long read metagenomics practical at EBAME18

ffurf icon ffurf

a very simple python package for defining and filling configurations

frontier icon frontier

Interfaces for the reading, storage and retrieval of large machine learning data sets for use with scikit-learn

gatk icon gatk

GATK Official Release Repository: contains the core MIT-licensed GATK framework, free for all uses

gputil icon gputil

A Python module for getting the GPU status from NVIDA GPUs using nvidia-smi programmically in Python

gretel icon gretel

An algorithm for recovering haplotypes from metagenomes

hansel icon hansel

A graph-inspired data structure for determining likely chains of sequences from breadcrumbs of evidence

hootsim icon hootsim

Extensible agent-based model simulator written in C++

hootsim2000 icon hootsim2000

A sequel to the extensible agent event based simulator, Hootsim

htslib icon htslib

C library for high-throughput sequencing data formats

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