Sam Nicholls's Projects
LOOK AT MY BEES
DOMjudge programming contest jury system
b͡e̶hòld t̷h͝e̴ s̶ke̡l͜tal͞ of ke̢rn̕e͢l! ̵this iş 2 ̢spo̸opy ͞4̶ ̴man̡y
Things that I need on my adventures against the computers
Things I need on my adventures against computers, deployed in a better way than last time
Long read metagenomics practical at EBAME18
for data flowing to birmingham
tap into the qc pool
First foray in to Fortran
a very simple python package for defining and filling configurations
Interfaces for the reading, storage and retrieval of large machine learning data sets for use with scikit-learn
Undergraduate Dissertation Project
GATK Official Release Repository: contains the core MIT-licensed GATK framework, free for all uses
Python sample application for wercker
Locating genetic regions that are "just right"
A Python module for getting the GPU status from NVIDA GPUs using nvidia-smi programmically in Python
Process consensus file for COG-UK data
An algorithm for recovering haplotypes from metagenomes
A graph-inspired data structure for determining likely chains of sequences from breadcrumbs of evidence
Extensible agent-based model simulator written in C++
A sequel to the extensible agent event based simulator, Hootsim
pythonic wrapper for libhts
C library for high-throughput sequencing data formats