Laboratory for the generation of synthetic populations
samthiriot / genlab Goto Github PK
View Code? Open in Web Editor NEWLaboratory for the generation of synthetic populations
genlab's Introduction
genlab's People
Contributors
Stargazers
Watchers
genlab's Issues
create a 2D pareto front view for genetic algorithms
radar display: accept only 2 dimensions ?
create a "one big radar" view for genetic algorithms
views a restored but should not
Extreme values in the code
In the future, it will be rather writing:
10E14 instead of Double.POSITIVE_INFINITY or Integer.MAX_VALUE
INF = StrictMath.pow(10, 14);
10E-14 instead of Double.MIN_VALUE
EPS = StrictMath.pow(10, -14);
wizards for loop and nsga2: copy parameters
parameters are lost during the automatic creation of workflows for encapsulation.
Encoding problem
Before I shut down GenLab
579593 [glConsumeMessages] WARN genlab.quality.TestResponsivity$PingRunnable - Wed Apr 29 15:17:25 CEST 2015 - BAD RESPONSIVITY DETECTED: delay before reaching the SWT thread: 8498 ms
579593 [glConsumeMessages] INFO genlab.quality.TestResponsivity$PingRunnable - Wed Apr 29 15:17:25 CEST 2015 - something is overloading the SWT thread. This is not a normal user experience. Please feel free to open a bug or download a newer version of the soft.
579593 [glConsumeMessages] WARN genlab.quality.TestResponsivity$PingRunnable - Wed Apr 29 15:17:25 CEST 2015 - starting the audit of usage of the SWT Thread by views...
After I shut down GenLab
!ENTRY org.eclipse.e4.ui.workbench.swt 4 2 2015-04-29 15:47:56.558
!MESSAGE Problems occurred when invoking code from plug-in: "org.eclipse.e4.ui.workbench.swt".
!STACK 0
org.eclipse.e4.core.di.InjectionException: java.lang.NullPointerException
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:63)
at org.eclipse.e4.core.internal.di.InjectorImpl.processAnnotated(InjectorImpl.java:877)
at org.eclipse.e4.core.internal.di.InjectorImpl.processAnnotated(InjectorImpl.java:857)
at org.eclipse.e4.core.internal.di.InjectorImpl.disposed(InjectorImpl.java:386)
at org.eclipse.e4.core.internal.di.Requestor.disposed(Requestor.java:132)
at org.eclipse.e4.core.internal.contexts.ContextObjectSupplier$ContextInjectionListener.update(ContextObjectSupplier.java:76)
at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.update(TrackableComputationExt.java:107)
at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.handleInvalid(TrackableComputationExt.java:70)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:171)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.clearContext(PartRenderingEngine.java:940)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.safeRemoveGui(PartRenderingEngine.java:920)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.access$3(PartRenderingEngine.java:828)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$8.run(PartRenderingEngine.java:823)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.removeGui(PartRenderingEngine.java:808)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.safeRemoveGui(PartRenderingEngine.java:860)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.access$3(PartRenderingEngine.java:828)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$8.run(PartRenderingEngine.java:823)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.removeGui(PartRenderingEngine.java:808)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.safeRemoveGui(PartRenderingEngine.java:860)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.access$3(PartRenderingEngine.java:828)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$8.run(PartRenderingEngine.java:823)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.removeGui(PartRenderingEngine.java:808)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.safeRemoveGui(PartRenderingEngine.java:860)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.access$3(PartRenderingEngine.java:828)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$8.run(PartRenderingEngine.java:823)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.removeGui(PartRenderingEngine.java:808)
at org.eclipse.ui.internal.WorkbenchWindow.hardClose(WorkbenchWindow.java:1606)
at org.eclipse.ui.internal.WorkbenchWindow.busyClose(WorkbenchWindow.java:1239)
at org.eclipse.ui.internal.WorkbenchWindow.access$14(WorkbenchWindow.java:1206)
at org.eclipse.ui.internal.WorkbenchWindow$10.run(WorkbenchWindow.java:1269)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1267)
at org.eclipse.ui.internal.Workbench$14.run(Workbench.java:1096)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.ui.internal.Workbench.busyClose(Workbench.java:1079)
at org.eclipse.ui.internal.Workbench.access$19(Workbench.java:1024)
at org.eclipse.ui.internal.Workbench$19.run(Workbench.java:1327)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.Workbench.close(Workbench.java:1325)
at org.eclipse.ui.internal.Workbench.close(Workbench.java:1298)
at org.eclipse.ui.internal.WorkbenchWindow.busyClose(WorkbenchWindow.java:1235)
at org.eclipse.ui.internal.WorkbenchWindow.access$14(WorkbenchWindow.java:1206)
at org.eclipse.ui.internal.WorkbenchWindow$10.run(WorkbenchWindow.java:1269)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1267)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1279)
at org.eclipse.ui.internal.WorkbenchWindow$6.close(WorkbenchWindow.java:474)
at org.eclipse.e4.ui.workbench.renderers.swt.WBWRenderer$12.shellClosed(WBWRenderer.java:612)
at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:98)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1392)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1416)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1401)
at org.eclipse.swt.widgets.Shell.closeWidget(Shell.java:646)
at org.eclipse.swt.widgets.Shell.gtk_delete_event(Shell.java:1228)
at org.eclipse.swt.widgets.Widget.windowProc(Widget.java:2082)
at org.eclipse.swt.widgets.Control.windowProc(Control.java:5467)
at org.eclipse.swt.widgets.Display.windowProc(Display.java:4569)
at org.eclipse.swt.internal.gtk.OS._gtk_main_do_event(Native Method)
at org.eclipse.swt.internal.gtk.OS.gtk_main_do_event(OS.java:8742)
at org.eclipse.swt.widgets.Display.eventProc(Display.java:1243)
at org.eclipse.swt.internal.gtk.OS._g_main_context_iteration(Native Method)
at org.eclipse.swt.internal.gtk.OS.g_main_context_iteration(OS.java:2288)
at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3361)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$9.run(PartRenderingEngine.java:1113)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.run(PartRenderingEngine.java:997)
at org.eclipse.e4.ui.internal.workbench.E4Workbench.createAndRunUI(E4Workbench.java:138)
at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:610)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:567)
at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:150)
at genlab.gui.Application.start(Application.java:21)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:354)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:181)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:636)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:591)
at org.eclipse.equinox.launcher.Main.run(Main.java:1450)
at org.eclipse.equinox.launcher.Main.main(Main.java:1426)
Caused by: java.lang.NullPointerException
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer.cleanUpCopy(ToolBarManagerRenderer.java:426)
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer.cleanUp(ToolBarManagerRenderer.java:409)
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer$7.widgetDisposed(ToolBarManagerRenderer.java:392)
at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:123)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1392)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1416)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1397)
at org.eclipse.swt.widgets.Widget.release(Widget.java:1206)
at org.eclipse.swt.widgets.Control.release(Control.java:3749)
at org.eclipse.swt.widgets.Widget.dispose(Widget.java:477)
at org.eclipse.jface.action.ToolBarManager.dispose(ToolBarManager.java:153)
at org.eclipse.ui.internal.e4.compatibility.ActionBars.dispose(ActionBars.java:196)
at org.eclipse.ui.internal.ViewSite.dispose(ViewSite.java:53)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.disposeSite(CompatibilityPart.java:415)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityView.disposeSite(CompatibilityView.java:307)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.internalDisposeSite(CompatibilityPart.java:405)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.invalidate(CompatibilityPart.java:233)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.destroy(CompatibilityPart.java:392)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:56)
... 90 more
!ENTRY org.eclipse.e4.ui.workbench 4 0 2015-04-29 15:47:56.559
!MESSAGE Exception occurred while unrendering: org.eclipse.e4.ui.model.application.ui.advanced.impl.PerspectiveImpl@15e1e8de (elementId: genlab.gui.perspectives.RunPerspective, tags: [persp.actionSet:genlab.gui.actionseats.run, persp.actionSet:org.eclipse.search.searchActionSet, persp.actionSet:org.eclipse.ui.edit.text.actionSet.annotationNavigation, persp.actionSet:org.eclipse.ui.edit.text.actionSet.navigation, persp.actionSet:org.eclipse.ui.edit.text.actionSet.convertLineDelimitersTo, persp.actionSet:org.eclipse.ui.externaltools.ExternalToolsSet, persp.actionSet:org.eclipse.ui.actionSet.keyBindings, persp.actionSet:org.eclipse.ui.actionSet.openFiles, persp.perspSC:genlab.gui.perspectives.WorkflowPerspective, persp.viewSC:genlab.gui.views.ProgressView], contributorURI: null) (widget: null, renderer: null, toBeRendered: true, onTop: false, visible: true, containerData: null, accessibilityPhrase: null) (label: Run perspective, iconURI: platform:/plugin/org.eclipse.ui/icons/full/eview16/default_persp.gif, tooltip: null, context: null, variables: [])
!STACK 0
org.eclipse.e4.core.di.InjectionException: java.lang.NullPointerException
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:63)
at org.eclipse.e4.core.internal.di.InjectorImpl.processAnnotated(InjectorImpl.java:877)
at org.eclipse.e4.core.internal.di.InjectorImpl.processAnnotated(InjectorImpl.java:857)
at org.eclipse.e4.core.internal.di.InjectorImpl.disposed(InjectorImpl.java:386)
at org.eclipse.e4.core.internal.di.Requestor.disposed(Requestor.java:132)
at org.eclipse.e4.core.internal.contexts.ContextObjectSupplier$ContextInjectionListener.update(ContextObjectSupplier.java:76)
at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.update(TrackableComputationExt.java:107)
at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.handleInvalid(TrackableComputationExt.java:70)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:171)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.clearContext(PartRenderingEngine.java:940)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.safeRemoveGui(PartRenderingEngine.java:920)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.access$3(PartRenderingEngine.java:828)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$8.run(PartRenderingEngine.java:823)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.removeGui(PartRenderingEngine.java:808)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.safeRemoveGui(PartRenderingEngine.java:860)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.access$3(PartRenderingEngine.java:828)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$8.run(PartRenderingEngine.java:823)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.removeGui(PartRenderingEngine.java:808)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.safeRemoveGui(PartRenderingEngine.java:860)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.access$3(PartRenderingEngine.java:828)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$8.run(PartRenderingEngine.java:823)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.removeGui(PartRenderingEngine.java:808)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.safeRemoveGui(PartRenderingEngine.java:860)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.access$3(PartRenderingEngine.java:828)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$8.run(PartRenderingEngine.java:823)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.removeGui(PartRenderingEngine.java:808)
at org.eclipse.ui.internal.WorkbenchWindow.hardClose(WorkbenchWindow.java:1606)
at org.eclipse.ui.internal.WorkbenchWindow.busyClose(WorkbenchWindow.java:1239)
at org.eclipse.ui.internal.WorkbenchWindow.access$14(WorkbenchWindow.java:1206)
at org.eclipse.ui.internal.WorkbenchWindow$10.run(WorkbenchWindow.java:1269)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1267)
at org.eclipse.ui.internal.Workbench$14.run(Workbench.java:1096)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.ui.internal.Workbench.busyClose(Workbench.java:1079)
at org.eclipse.ui.internal.Workbench.access$19(Workbench.java:1024)
at org.eclipse.ui.internal.Workbench$19.run(Workbench.java:1327)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.Workbench.close(Workbench.java:1325)
at org.eclipse.ui.internal.Workbench.close(Workbench.java:1298)
at org.eclipse.ui.internal.WorkbenchWindow.busyClose(WorkbenchWindow.java:1235)
at org.eclipse.ui.internal.WorkbenchWindow.access$14(WorkbenchWindow.java:1206)
at org.eclipse.ui.internal.WorkbenchWindow$10.run(WorkbenchWindow.java:1269)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1267)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1279)
at org.eclipse.ui.internal.WorkbenchWindow$6.close(WorkbenchWindow.java:474)
at org.eclipse.e4.ui.workbench.renderers.swt.WBWRenderer$12.shellClosed(WBWRenderer.java:612)
at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:98)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1392)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1416)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1401)
at org.eclipse.swt.widgets.Shell.closeWidget(Shell.java:646)
at org.eclipse.swt.widgets.Shell.gtk_delete_event(Shell.java:1228)
at org.eclipse.swt.widgets.Widget.windowProc(Widget.java:2082)
at org.eclipse.swt.widgets.Control.windowProc(Control.java:5467)
at org.eclipse.swt.widgets.Display.windowProc(Display.java:4569)
at org.eclipse.swt.internal.gtk.OS._gtk_main_do_event(Native Method)
at org.eclipse.swt.internal.gtk.OS.gtk_main_do_event(OS.java:8742)
at org.eclipse.swt.widgets.Display.eventProc(Display.java:1243)
at org.eclipse.swt.internal.gtk.OS._g_main_context_iteration(Native Method)
at org.eclipse.swt.internal.gtk.OS.g_main_context_iteration(OS.java:2288)
at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3361)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$9.run(PartRenderingEngine.java:1113)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.run(PartRenderingEngine.java:997)
at org.eclipse.e4.ui.internal.workbench.E4Workbench.createAndRunUI(E4Workbench.java:138)
at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:610)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:567)
at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:150)
at genlab.gui.Application.start(Application.java:21)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:354)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:181)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:636)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:591)
at org.eclipse.equinox.launcher.Main.run(Main.java:1450)
at org.eclipse.equinox.launcher.Main.main(Main.java:1426)
Caused by: java.lang.NullPointerException
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer.cleanUpCopy(ToolBarManagerRenderer.java:426)
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer.cleanUp(ToolBarManagerRenderer.java:409)
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer$7.widgetDisposed(ToolBarManagerRenderer.java:392)
at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:123)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1392)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1416)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1397)
at org.eclipse.swt.widgets.Widget.release(Widget.java:1206)
at org.eclipse.swt.widgets.Control.release(Control.java:3749)
at org.eclipse.swt.widgets.Widget.dispose(Widget.java:477)
at org.eclipse.jface.action.ToolBarManager.dispose(ToolBarManager.java:153)
at org.eclipse.ui.internal.e4.compatibility.ActionBars.dispose(ActionBars.java:196)
at org.eclipse.ui.internal.ViewSite.dispose(ViewSite.java:53)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.disposeSite(CompatibilityPart.java:415)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityView.disposeSite(CompatibilityView.java:307)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.internalDisposeSite(CompatibilityPart.java:405)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.invalidate(CompatibilityPart.java:233)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.destroy(CompatibilityPart.java:392)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:56)
... 90 more
!ENTRY org.eclipse.e4.ui.workbench.swt 4 2 2015-04-29 15:47:56.578
!MESSAGE Problems occurred when invoking code from plug-in: "org.eclipse.e4.ui.workbench.swt".
!STACK 0
org.eclipse.e4.core.di.InjectionException: java.lang.NullPointerException
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:63)
at org.eclipse.e4.core.internal.di.InjectorImpl.processAnnotated(InjectorImpl.java:877)
at org.eclipse.e4.core.internal.di.InjectorImpl.processAnnotated(InjectorImpl.java:857)
at org.eclipse.e4.core.internal.di.InjectorImpl.disposed(InjectorImpl.java:386)
at org.eclipse.e4.core.internal.di.Requestor.disposed(Requestor.java:132)
at org.eclipse.e4.core.internal.contexts.ContextObjectSupplier$ContextInjectionListener.update(ContextObjectSupplier.java:76)
at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.update(TrackableComputationExt.java:107)
at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.handleInvalid(TrackableComputationExt.java:70)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:171)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.clearContext(PartRenderingEngine.java:940)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.safeRemoveGui(PartRenderingEngine.java:920)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.access$3(PartRenderingEngine.java:828)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$8.run(PartRenderingEngine.java:823)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.removeGui(PartRenderingEngine.java:808)
at org.eclipse.ui.internal.WorkbenchWindow.hardClose(WorkbenchWindow.java:1606)
at org.eclipse.ui.internal.WorkbenchWindow.busyClose(WorkbenchWindow.java:1239)
at org.eclipse.ui.internal.WorkbenchWindow.access$14(WorkbenchWindow.java:1206)
at org.eclipse.ui.internal.WorkbenchWindow$10.run(WorkbenchWindow.java:1269)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1267)
at org.eclipse.ui.internal.Workbench$14.run(Workbench.java:1096)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.ui.internal.Workbench.busyClose(Workbench.java:1079)
at org.eclipse.ui.internal.Workbench.access$19(Workbench.java:1024)
at org.eclipse.ui.internal.Workbench$19.run(Workbench.java:1327)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.Workbench.close(Workbench.java:1325)
at org.eclipse.ui.internal.Workbench.close(Workbench.java:1298)
at org.eclipse.ui.internal.WorkbenchWindow.busyClose(WorkbenchWindow.java:1235)
at org.eclipse.ui.internal.WorkbenchWindow.access$14(WorkbenchWindow.java:1206)
at org.eclipse.ui.internal.WorkbenchWindow$10.run(WorkbenchWindow.java:1269)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1267)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1279)
at org.eclipse.ui.internal.WorkbenchWindow$6.close(WorkbenchWindow.java:474)
at org.eclipse.e4.ui.workbench.renderers.swt.WBWRenderer$12.shellClosed(WBWRenderer.java:612)
at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:98)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1392)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1416)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1401)
at org.eclipse.swt.widgets.Shell.closeWidget(Shell.java:646)
at org.eclipse.swt.widgets.Shell.gtk_delete_event(Shell.java:1228)
at org.eclipse.swt.widgets.Widget.windowProc(Widget.java:2082)
at org.eclipse.swt.widgets.Control.windowProc(Control.java:5467)
at org.eclipse.swt.widgets.Display.windowProc(Display.java:4569)
at org.eclipse.swt.internal.gtk.OS._gtk_main_do_event(Native Method)
at org.eclipse.swt.internal.gtk.OS.gtk_main_do_event(OS.java:8742)
at org.eclipse.swt.widgets.Display.eventProc(Display.java:1243)
at org.eclipse.swt.internal.gtk.OS._g_main_context_iteration(Native Method)
at org.eclipse.swt.internal.gtk.OS.g_main_context_iteration(OS.java:2288)
at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3361)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$9.run(PartRenderingEngine.java:1113)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.run(PartRenderingEngine.java:997)
at org.eclipse.e4.ui.internal.workbench.E4Workbench.createAndRunUI(E4Workbench.java:138)
at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:610)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:567)
at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:150)
at genlab.gui.Application.start(Application.java:21)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:354)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:181)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:636)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:591)
at org.eclipse.equinox.launcher.Main.run(Main.java:1450)
at org.eclipse.equinox.launcher.Main.main(Main.java:1426)
Caused by: java.lang.NullPointerException
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer.cleanUpCopy(ToolBarManagerRenderer.java:426)
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer.cleanUp(ToolBarManagerRenderer.java:409)
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer$7.widgetDisposed(ToolBarManagerRenderer.java:392)
at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:123)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1392)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1416)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1397)
at org.eclipse.swt.widgets.Widget.release(Widget.java:1206)
at org.eclipse.swt.widgets.Control.release(Control.java:3749)
at org.eclipse.swt.widgets.Widget.dispose(Widget.java:477)
at org.eclipse.jface.action.ToolBarManager.dispose(ToolBarManager.java:153)
at org.eclipse.ui.internal.e4.compatibility.ActionBars.dispose(ActionBars.java:196)
at org.eclipse.ui.internal.ViewSite.dispose(ViewSite.java:53)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.disposeSite(CompatibilityPart.java:415)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityView.disposeSite(CompatibilityView.java:307)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.internalDisposeSite(CompatibilityPart.java:405)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.invalidate(CompatibilityPart.java:233)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.destroy(CompatibilityPart.java:392)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:56)
... 76 more
!ENTRY org.eclipse.e4.ui.workbench 4 0 2015-04-29 15:47:56.579
!MESSAGE Exception occurred while unrendering: org.eclipse.e4.ui.model.application.ui.basic.impl.TrimmedWindowImpl@33b299f7 (elementId: IDEWindow, tags: [topLevel, shellMaximized], contributorURI: platform:/plugin/org.eclipse.ui.workbench) (widget: null, renderer: null, toBeRendered: true, onTop: false, visible: true, containerData: null, accessibilityPhrase: null) (label: %trimmedwindow.label.eclipseSDK, iconURI: null, tooltip: null, context: null, variables: [], x: 0, y: 31, width: 1026, height: 768)
!STACK 0
org.eclipse.e4.core.di.InjectionException: java.lang.NullPointerException
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:63)
at org.eclipse.e4.core.internal.di.InjectorImpl.processAnnotated(InjectorImpl.java:877)
at org.eclipse.e4.core.internal.di.InjectorImpl.processAnnotated(InjectorImpl.java:857)
at org.eclipse.e4.core.internal.di.InjectorImpl.disposed(InjectorImpl.java:386)
at org.eclipse.e4.core.internal.di.Requestor.disposed(Requestor.java:132)
at org.eclipse.e4.core.internal.contexts.ContextObjectSupplier$ContextInjectionListener.update(ContextObjectSupplier.java:76)
at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.update(TrackableComputationExt.java:107)
at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.handleInvalid(TrackableComputationExt.java:70)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:171)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.clearContext(PartRenderingEngine.java:940)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.safeRemoveGui(PartRenderingEngine.java:920)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.access$3(PartRenderingEngine.java:828)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$8.run(PartRenderingEngine.java:823)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.removeGui(PartRenderingEngine.java:808)
at org.eclipse.ui.internal.WorkbenchWindow.hardClose(WorkbenchWindow.java:1606)
at org.eclipse.ui.internal.WorkbenchWindow.busyClose(WorkbenchWindow.java:1239)
at org.eclipse.ui.internal.WorkbenchWindow.access$14(WorkbenchWindow.java:1206)
at org.eclipse.ui.internal.WorkbenchWindow$10.run(WorkbenchWindow.java:1269)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1267)
at org.eclipse.ui.internal.Workbench$14.run(Workbench.java:1096)
at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
at org.eclipse.ui.internal.Workbench.busyClose(Workbench.java:1079)
at org.eclipse.ui.internal.Workbench.access$19(Workbench.java:1024)
at org.eclipse.ui.internal.Workbench$19.run(Workbench.java:1327)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.Workbench.close(Workbench.java:1325)
at org.eclipse.ui.internal.Workbench.close(Workbench.java:1298)
at org.eclipse.ui.internal.WorkbenchWindow.busyClose(WorkbenchWindow.java:1235)
at org.eclipse.ui.internal.WorkbenchWindow.access$14(WorkbenchWindow.java:1206)
at org.eclipse.ui.internal.WorkbenchWindow$10.run(WorkbenchWindow.java:1269)
at org.eclipse.swt.custom.BusyIndicator.showWhile(BusyIndicator.java:70)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1267)
at org.eclipse.ui.internal.WorkbenchWindow.close(WorkbenchWindow.java:1279)
at org.eclipse.ui.internal.WorkbenchWindow$6.close(WorkbenchWindow.java:474)
at org.eclipse.e4.ui.workbench.renderers.swt.WBWRenderer$12.shellClosed(WBWRenderer.java:612)
at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:98)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1392)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1416)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1401)
at org.eclipse.swt.widgets.Shell.closeWidget(Shell.java:646)
at org.eclipse.swt.widgets.Shell.gtk_delete_event(Shell.java:1228)
at org.eclipse.swt.widgets.Widget.windowProc(Widget.java:2082)
at org.eclipse.swt.widgets.Control.windowProc(Control.java:5467)
at org.eclipse.swt.widgets.Display.windowProc(Display.java:4569)
at org.eclipse.swt.internal.gtk.OS._gtk_main_do_event(Native Method)
at org.eclipse.swt.internal.gtk.OS.gtk_main_do_event(OS.java:8742)
at org.eclipse.swt.widgets.Display.eventProc(Display.java:1243)
at org.eclipse.swt.internal.gtk.OS._g_main_context_iteration(Native Method)
at org.eclipse.swt.internal.gtk.OS.g_main_context_iteration(OS.java:2288)
at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3361)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$9.run(PartRenderingEngine.java:1113)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.run(PartRenderingEngine.java:997)
at org.eclipse.e4.ui.internal.workbench.E4Workbench.createAndRunUI(E4Workbench.java:138)
at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:610)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:332)
at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:567)
at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:150)
at genlab.gui.Application.start(Application.java:21)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:110)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:79)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:354)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:181)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:636)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:591)
at org.eclipse.equinox.launcher.Main.run(Main.java:1450)
at org.eclipse.equinox.launcher.Main.main(Main.java:1426)
Caused by: java.lang.NullPointerException
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer.cleanUpCopy(ToolBarManagerRenderer.java:426)
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer.cleanUp(ToolBarManagerRenderer.java:409)
at org.eclipse.e4.ui.workbench.renderers.swt.ToolBarManagerRenderer$7.widgetDisposed(ToolBarManagerRenderer.java:392)
at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:123)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1392)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1416)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1397)
at org.eclipse.swt.widgets.Widget.release(Widget.java:1206)
at org.eclipse.swt.widgets.Control.release(Control.java:3749)
at org.eclipse.swt.widgets.Widget.dispose(Widget.java:477)
at org.eclipse.jface.action.ToolBarManager.dispose(ToolBarManager.java:153)
at org.eclipse.ui.internal.e4.compatibility.ActionBars.dispose(ActionBars.java:196)
at org.eclipse.ui.internal.ViewSite.dispose(ViewSite.java:53)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.disposeSite(CompatibilityPart.java:415)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityView.disposeSite(CompatibilityView.java:307)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.internalDisposeSite(CompatibilityPart.java:405)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.invalidate(CompatibilityPart.java:233)
at org.eclipse.ui.internal.e4.compatibility.CompatibilityPart.destroy(CompatibilityPart.java:392)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:56)
... 76 more
!ENTRY org.eclipse.osgi 4 0 2015-04-29 15:47:56.658
!MESSAGE An unexpected runtime error has occurred.
!STACK 0
org.eclipse.swt.SWTException: Device is disposed
at org.eclipse.swt.SWT.error(SWT.java:4397)
at org.eclipse.swt.SWT.error(SWT.java:4312)
at org.eclipse.swt.SWT.error(SWT.java:4283)
at org.eclipse.swt.widgets.Display.error(Display.java:1204)
at org.eclipse.swt.widgets.Display.asyncExec(Display.java:720)
at org.eclipse.ui.internal.WorkbenchWindow$9.changed(WorkbenchWindow.java:662)
at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.update(TrackableComputationExt.java:110)
at org.eclipse.e4.core.internal.contexts.EclipseContext.processScheduled(EclipseContext.java:334)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:173)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.core.internal.contexts.osgi.EclipseContextOSGi.dispose(EclipseContextOSGi.java:100)
at org.eclipse.e4.core.internal.contexts.osgi.EclipseContextOSGi.bundleChanged(EclipseContextOSGi.java:131)
at org.eclipse.osgi.framework.internal.core.BundleContextImpl.dispatchEvent(BundleContextImpl.java:847)
at org.eclipse.osgi.framework.eventmgr.EventManager.dispatchEvent(EventManager.java:230)
at org.eclipse.osgi.framework.eventmgr.ListenerQueue.dispatchEventSynchronous(ListenerQueue.java:148)
at org.eclipse.osgi.framework.internal.core.Framework.publishBundleEventPrivileged(Framework.java:1568)
at org.eclipse.osgi.framework.internal.core.Framework.publishBundleEvent(Framework.java:1504)
at org.eclipse.osgi.framework.internal.core.Framework.publishBundleEvent(Framework.java:1499)
at org.eclipse.osgi.framework.internal.core.Framework.shutdown(Framework.java:681)
at org.eclipse.osgi.framework.internal.core.Framework.close(Framework.java:600)
at org.eclipse.core.runtime.adaptor.EclipseStarter.shutdown(EclipseStarter.java:400)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:200)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:636)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:591)
at org.eclipse.equinox.launcher.Main.run(Main.java:1450)
at org.eclipse.equinox.launcher.Main.main(Main.java:1426)
!ENTRY org.eclipse.e4.ui.workbench 4 0 2015-04-29 15:47:56.659
!MESSAGE FrameworkEvent ERROR
!STACK 0
org.eclipse.swt.SWTException: Device is disposed
at org.eclipse.swt.SWT.error(SWT.java:4397)
at org.eclipse.swt.SWT.error(SWT.java:4312)
at org.eclipse.swt.SWT.error(SWT.java:4283)
at org.eclipse.swt.widgets.Display.error(Display.java:1204)
at org.eclipse.swt.widgets.Display.asyncExec(Display.java:720)
at org.eclipse.ui.internal.WorkbenchWindow$9.changed(WorkbenchWindow.java:662)
at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.update(TrackableComputationExt.java:110)
at org.eclipse.e4.core.internal.contexts.EclipseContext.processScheduled(EclipseContext.java:334)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:173)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:160)
at org.eclipse.e4.core.internal.contexts.osgi.EclipseContextOSGi.dispose(EclipseContextOSGi.java:100)
at org.eclipse.e4.core.internal.contexts.osgi.EclipseContextOSGi.bundleChanged(EclipseContextOSGi.java:131)
at org.eclipse.osgi.framework.internal.core.BundleContextImpl.dispatchEvent(BundleContextImpl.java:847)
at org.eclipse.osgi.framework.eventmgr.EventManager.dispatchEvent(EventManager.java:230)
at org.eclipse.osgi.framework.eventmgr.ListenerQueue.dispatchEventSynchronous(ListenerQueue.java:148)
at org.eclipse.osgi.framework.internal.core.Framework.publishBundleEventPrivileged(Framework.java:1568)
at org.eclipse.osgi.framework.internal.core.Framework.publishBundleEvent(Framework.java:1504)
at org.eclipse.osgi.framework.internal.core.Framework.publishBundleEvent(Framework.java:1499)
at org.eclipse.osgi.framework.internal.core.Framework.shutdown(Framework.java:681)
at org.eclipse.osgi.framework.internal.core.Framework.close(Framework.java:600)
at org.eclipse.core.runtime.adaptor.EclipseStarter.shutdown(EclipseStarter.java:400)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:200)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:636)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:591)
at org.eclipse.equinox.launcher.Main.run(Main.java:1450)
at org.eclipse.equinox.launcher.Main.main(Main.java:1426)
Ending session...
Session teminated.
stopping R daemon... R://localhost
Connecting R://localhost ... ok
Connection R://localhost succeded.
R daemon stoped.
excessive memory consumption and JVM freeze when graphsteam graphs are used intensively
Branch dev: Unable to cast integer from gene x
4433 [glConsumeMessages] ERROR genlab.core.exec.WorkingRunnerThread - Wed May 06 16:12:45 CEST 2015 - task multi-objective test functions 1 raised an error:unable to cast integer from gene x
genlab.core.commons.WrongParametersException: unable to cast integer from gene x
at genlab.core.model.meta.basics.flowtypes.DoubleFlowType.decodeFrom(DoubleFlowType.java:29)
at genlab.core.model.meta.basics.flowtypes.DoubleFlowType.decodeFrom(DoubleFlowType.java:1)
at genlab.core.model.meta.InputOutput.decodeFromParameters(InputOutput.java:121)
at genlab.core.model.exec.AbstractAlgoExecution.getInputValueForInput(AbstractAlgoExecution.java:167)
at genlab.core.model.exec.AbstractAlgoExecution.getInputValueForInput(AbstractAlgoExecution.java:177)
at genlab.algog.algos.meta.VerificationFunctionsAlgo$1.run(VerificationFunctionsAlgo.java:150)
at genlab.core.exec.WorkingRunnerThread.run(WorkingRunnerThread.java:43)
fix graphiti layout
the autolayout (named "beautify" in menus) is not working with compounds
open an empty default workflow after creating the project
create a 2D plot visualization taking as input a table
with parameters to select the dimensions to display. Will be used notably for observing the pareto front for genetic algos
fix dependancies on git
CSV export
I think there is a problem, I'll explain later
fix intuitive creation of objects which proposes genetic algo elements even outside of genetic algos
links from outside nsga2 are not working
create a binary distribution
NSGA-II: Fitness, crowding distance etc.
Perhaps we should gather informations about an individual (fitness, crowding distance and so on) inside AnIndividual class.
clean code for NSGA2
upgrade to next Eclipse version
mutation operator for NSGA2 that allows to explore the lower bound
Today: if min = 0.0 and max = 1.0 (probability), then the current mutation algorithm has no chance to ever explore the exact 0.0 neither 1.0 values.
First test by playing with the "mu" parameter; else implement various mutation operators
ensure view parts are always refreshed at end of exec or when brought to top
freeze when running a workflow
sometimes the gui freezes after starting a run
write files: update even for continuous inputs
fix ScatterPlot
add preferences for logging levels
create a wizard to facilitate the use of genetic algorithms
create a 3D view for pareto fronts
horizontal scrolling for messages view
add examples to the "new" menu
Improvement of the goal element
Currently, when we launch our NSGA-II on the Watts-Strogatz graph, if we want to achieve a clustering rate of 0.015 with a margin of error of 0.004, we can't.
So, we have to add into the goal element a value which refers to the margin of error.
implement dominance based on phenotypic distance
run button: run even when the workflow is not selected in the tree view
integrate novel graphstream 1.3 formats
add goals for multi objective optimization for "minimize" (no numeric target)
implement SBX for integer
(writers / tables) write table as CSV
If the file into which write the result is not set as a file, warn it before starting execution or save the results in a temp. file!
rmi: when the server is restarted, reconnect
Error during the execution of BNH test
Setup
name of the problem test: Binh and Korn "BNH"
initial number of iterations: 100
initial size of the population: 1000
value for minimization: -2147483
Notes
the execution has been stopped after the 100. iteration
the output csv file has been updated successfully
Error
833712 [glConsumeMessages] ERROR genlab.gui.jfreechart.exec.ScatterPlotExec - Wed Apr 29 11:03:03 CEST 2015 - error during the execution: Invalid thread access
org.eclipse.swt.SWTException: Invalid thread access
at org.eclipse.swt.SWT.error(SWT.java:4397)
at org.eclipse.swt.SWT.error(SWT.java:4312)
at org.eclipse.swt.SWT.error(SWT.java:4283)
at org.eclipse.swt.widgets.Widget.error(Widget.java:481)
at org.eclipse.swt.widgets.Widget.checkWidget(Widget.java:419)
at org.eclipse.swt.widgets.Control.redraw(Control.java:3663)
at org.jfree.experimental.chart.swt.ChartComposite.chartChanged(ChartComposite.java:972)
at org.jfree.chart.JFreeChart.notifyListeners(JFreeChart.java:1515)
at org.jfree.chart.JFreeChart.plotChanged(JFreeChart.java:1581)
at org.jfree.chart.plot.Plot.notifyListeners(Plot.java:970)
at org.jfree.chart.plot.Plot.fireChangeEvent(Plot.java:981)
at org.jfree.chart.plot.Plot.axisChanged(Plot.java:1217)
at org.jfree.chart.axis.Axis.notifyListeners(Axis.java:1222)
at org.jfree.chart.axis.Axis.fireChangeEvent(Axis.java:1233)
at org.jfree.chart.axis.Axis.setLabel(Axis.java:391)
at genlab.gui.jfreechart.views.ScatterView.loadDataFromTable(ScatterView.java:76)
at genlab.gui.jfreechart.views.ScatterView.setData(ScatterView.java:146)
at genlab.gui.jfreechart.exec.ScatterPlotExec.displayResultsSync(ScatterPlotExec.java:56)
at genlab.gui.algos.AbstractOpenViewAlgoExec.displayResultsAsync(AbstractOpenViewAlgoExec.java:164)
at genlab.gui.algos.AbstractOpenViewAlgoExec.run(AbstractOpenViewAlgoExec.java:210)
at genlab.core.exec.WorkingRunnerThread.run(WorkingRunnerThread.java:43)
833712 [glConsumeMessages] ERROR genlab.core.model.exec.WorkflowExecution - Wed Apr 29 11:03:03 CEST 2015 - end of execution for workflow test function Bink Korn for multi-objective genetic algorithms (failure)
progress view: lost tasks
some tasks lost their parents but are still present in the progress tree, notably for intensive computations (genetic algos)
upgrade to graphstream 1.3
radar view / genetic algos
the view is not always refreshed for each iteration
fix bug with forest fire and JNA
NSGA2 regression: nullpointerexception when there are constrainsts on the search domain
java.lang.NullPointerException
at genlab.algog.algos.exec.NSGA2Exec.dominates(NSGA2Exec.java:70)
at genlab.algog.algos.exec.NSGA2Exec.fastNonDominatedSort(NSGA2Exec.java:126)
at genlab.algog.algos.exec.NSGA2Exec.analyzeLastPopulation(NSGA2Exec.java:415)
at genlab.algog.algos.exec.NSGA2Exec.selectIndividuals(NSGA2Exec.java:425)
at genlab.algog.algos.exec.NSGA2Exec.prepareNextGeneration(NSGA2Exec.java:699)
at genlab.algog.algos.exec.AbstractGeneticExplorationAlgoExec.computationStateChanged(AbstractGeneticExplorationAlgoExec.java:733)
at genlab.core.model.exec.ComputationProgressWithSteps.dispatchComputationStateChanged(ComputationProgressWithSteps.java:256)
at genlab.core.model.exec.ComputationProgressWithSteps.setComputationState(ComputationProgressWithSteps.java:219)
at genlab.core.model.exec.AbstractContainerExecutionSupervisor.updateProgressFromChildren(AbstractContainerExecutionSupervisor.java:340)
at genlab.core.model.exec.AbstractContainerExecution.computationStateChanged(AbstractContainerExecution.java:108)
at genlab.algog.algos.exec.GeneticExplorationOneGeneration.computationStateChanged(GeneticExplorationOneGeneration.java:280)
at genlab.core.model.exec.ComputationProgressWithSteps.dispatchComputationStateChanged(ComputationProgressWithSteps.java:256)
at genlab.core.model.exec.ComputationProgressWithSteps.setComputationState(ComputationProgressWithSteps.java:219)
at genlab.core.model.exec.AbstractContainerExecution.updateProgressFromChildren(AbstractContainerExecution.java:191)
at genlab.core.model.exec.AbstractContainerExecution.computationStateChanged(AbstractContainerExecution.java:108)
at genlab.core.model.exec.ComputationProgressWithSteps.dispatchComputationStateChanged(ComputationProgressWithSteps.java:256)
at genlab.core.model.exec.ComputationProgressWithSteps.setComputationState(ComputationProgressWithSteps.java:219)
at genlab.algog.algos.exec.GoalExec.run(GoalExec.java:48)
at genlab.core.exec.WorkingRunnerThread.run(WorkingRunnerThread.java:93)
661981 [glConsumeMessages] INFO genlab.algog.algos.exec.NSGA2Exec - Thu May 07 01:18:14 CEST 2015 - Retrieved 99 individuals from the previous generation (0)
661982 [glConsumeMessages] WARN genlab.core.model.exec.ComputationProgressWithSteps - Thu May 07 01:18:14 CEST 2015 - catched an exception while notifying listener genlab.algog.algos.exec.NSGA2Exec@1
fd586bf of computation state change (genlab.core.model.exec.ComputationProgressWithSteps@ad02020)
java.lang.NullPointerException
at genlab.algog.algos.exec.NSGA2Exec.dominates(NSGA2Exec.java:70)
at genlab.algog.algos.exec.NSGA2Exec.fastNonDominatedSort(NSGA2Exec.java:126)
at genlab.algog.algos.exec.NSGA2Exec.analyzeLastPopulation(NSGA2Exec.java:415)
at genlab.algog.algos.exec.NSGA2Exec.selectIndividuals(NSGA2Exec.java:425)
at genlab.algog.algos.exec.NSGA2Exec.prepareNextGeneration(NSGA2Exec.java:699)
at genlab.algog.algos.exec.AbstractGeneticExplorationAlgoExec.computationStateChanged(AbstractGeneticExplorationAlgoExec.java:733)
at genlab.core.model.exec.ComputationProgressWithSteps.dispatchComputationStateChanged(ComputationProgressWithSteps.java:256)
at genlab.core.model.exec.ComputationProgressWithSteps.setComputationState(ComputationProgressWithSteps.java:219)
at genlab.core.model.exec.AbstractContainerExecutionSupervisor.updateProgressFromChildren(AbstractContainerExecutionSupervisor.java:340)
at genlab.core.model.exec.AbstractContainerExecution.computationStateChanged(AbstractContainerExecution.java:108)
at genlab.algog.algos.exec.GeneticExplorationOneGeneration.computationStateChanged(GeneticExplorationOneGeneration.java:280)
at genlab.core.model.exec.ComputationProgressWithSteps.dispatchComputationStateChanged(ComputationProgressWithSteps.java:256)
at genlab.core.model.exec.ComputationProgressWithSteps.setComputationState(ComputationProgressWithSteps.java:219)
at genlab.core.model.exec.AbstractContainerExecution.updateProgressFromChildren(AbstractContainerExecution.java:191)
at genlab.core.model.exec.AbstractContainerExecution.computationStateChanged(AbstractContainerExecution.java:108)
at genlab.core.model.exec.ComputationProgressWithSteps.dispatchComputationStateChanged(ComputationProgressWithSteps.java:256)
at genlab.core.model.exec.ComputationProgressWithSteps.setComputationState(ComputationProgressWithSteps.java:219)
at genlab.algog.algos.exec.GoalExec.run(GoalExec.java:48)
at genlab.core.exec.WorkingRunnerThread.run(WorkingRunnerThread.java:93)
add parameter for gene mutation parameters
allow negative values for min in double genes
detect "append table" errors due to similar algorithm names
during the workflow check, ensure inputs of the "append table" algorithm don't have the same name; this would fail at runtime
NSGA-II
When we generate the population, don't remove the individuals who trigger some constraints. We need them and we need to count how many constraints they triggered to rank them.
fix deletion of workflows
example: create an example, run id, erase it, try to create it again => issue
create an arithmetic algo for formulas
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.