Comments (5)
This is due to faulty special handling of single rows of foreground for fast processing. It gets confused between the different orientations of arrays. Will issue a fix soon.
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Thank you for reporting this! I'll take a look.
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Thank you :-)
from connected-components-3d.
Well, that was a subtle bug. 1D arrays are both C and F contiguous. Some parts of the code were checking for if F else
and others were doing if C else
and this caused 1D arrays to have problems.
from connected-components-3d.
Released a fix in 3.10.3. Check it out!
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Related Issues (20)
- Applying Dust and largest_k dtype output option HOT 2
- dust sugnature HOT 1
- Massive memory Leak HOT 7
- Cannot find reference 'dust' in 'cc3d.py' HOT 2
- Question on comparing individual lesions between two masks based on the cc3d.statistics output. HOT 1
- Additional metrics support HOT 2
- Does cc3d also work with memmory-mapped numpy arrays and array-like data? HOT 14
- cc3d.statistics["bounding_boxes"] are wrong HOT 1
- largest_k fails for transposed arrays HOT 6
- About the lastest_k function HOT 4
- Statistics output HOT 7
- Question on the output of contacts HOT 9
- Periodic Boundary Conditions HOT 4
- Is the output label of largest_k ordered? HOT 2
- Add a better error for type support. HOT 4
- Any way to make this GPU Compatible? HOT 6
- Applying dust to labels does not do anything HOT 3
- Support for Numpy 2.0 HOT 3
- Supporting V1 dtype HOT 4
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