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My professional projects at Calico are primarily in private repos which I hope to open-source in the future. The projects largely fit into two buckets:
- Development of a robust ecosystem for working with mass spectrometry data combining a configurable Dockerized pipeline and R packages supporting the pipeline and downstream analysis.
- Approaches using genome-scale systems biology to understand regulation. See Induction Dynamics Expression Atlas and Impulse.
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My side-projects and past work can be found on my personal website. Here is a brief rundown.
- ๐ก ๐ฅ Past research
- Fight Prior
shackett / crispr-caller Goto Github PK
View Code? Open in Web Editor NEWA method for confirming CRISPR knockouts of genes from sanger sequencing data