The MIDAS R package reproduces the statistical analysis for the MIDAS study using a bundled vignette.
The MIDAS R package and its vignette can package can be installed by running the following in R/Rstudio:
install.packages("remotes")
remotes::install_bioc("qvalue")
remotes::install_github(
"KevinGHicks/MIDAS",
dependencies = TRUE,
build_vignettes = TRUE
)
To see the vignette, run:
vignette(package = "midas", topic = "pipeline")