shimo-lab / drug-gene-analogy

Predicting Drug-Gene Relations via Analogy Tasks with Word Embeddings

Drug-Gene-Analogy

Predicting Drug-Gene Relations via Analogy Tasks with Word Embeddings
Hiroaki Yamagiwa, Ryoma Hashimoto, Kiwamu Arakane, Ken Murakami, Shou Soeda, Momose Oyama, Mariko Okada, Hidetoshi Shimodaira
Preprint

Code

The source code is being organized and will be available soon.

Reference

• Chen et al. Bioconceptvec: Creating and evaluating literature-based biomedical concept embeddings on a large scale. PLoS Comput Biol. (2020).

Citation

If you find our code or model useful in your research, please cite our paper:

@misc{yamagiwa2024predicting,
      title={Predicting Drug-Gene Relations via Analogy Tasks with Word Embeddings}, 
      author={Hiroaki Yamagiwa and Ryoma Hashimoto and Kiwamu Arakane and Ken Murakami and Shou Soeda and Momose Oyama and Mariko Okada and Hidetoshi Shimodaira},
      year={2024},
      eprint={2406.00984},
      archivePrefix={arXiv},
      primaryClass={cs.CL}
}