This project forked from ctskennerton/fx_tools
Very small utilities for interrogating fasta and fastq files
License: MIT License
Very small utilities for interrogating fasta and fastq files.
count the records in a fasta file. Equivelent to grep -c '^>' file.fa
count the records in a fastq file.
only keep reads if they meet certain length of GC requirements
Print tabular summary statistics on a whole file. The default columns are count, sum, min, max, mean, median, n50
remove records that have identical header names
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