smaranjitghose / auto_vaidya

An open-source project for applying deep learning to medical scenarios

Auto Vaidya

An open source solution for creating end-end web app for employing the power of deep learning in various clinical scenarios like implant detection, pneumonia detection, brain mri segmentation etc.

Suggestions for PR:

• Please give your PR for the test branch unless requested otherwise by the project maintainer
• Name your PR appropiately
• Ensure that you had already raised an issue for this PR and the project maintainer had approved and assigned you
• In the PR description, typically the following are expected:
  • Dataset Used:
  • Dataset Size:
  • Dataset Source:
  • Link to Colab Notebook: Please ensure you give access for view to anyone with link
  • Your Exploratory Data Analysis [Snapshots of the relevant ones and your inference from that]
  • Any Pre-Processing methods used. [Elaborate on them]
  • Your framework to train
  • Different methods used for training
  • Test/Train Split
  • Results: Please do not simply state test accuracy. Other perfomance metrics like F1 score,etc are expected
  • ** Draw a table to show the comparitive analysis of the performance of the different methods you used
  • Conclusion: Which method you think is best and why?
• A copy of the notebook used for your training is expected inside the notebooks/ directory.
• Please name the notebook as name_of_the_problem_your_github_username
• The model files are expected to be inside a models\name_of_your_problem\ directory
• If you are using TensorFlow 2.0, please give both the h5 as well as saved_model file
• Once your PR, gets approved uptil this, proceed with a follow up pr to integrate it inside the streamlit app. Refer this if you are unaware of how to use streamlit and host it
• For the streamlit app, it would be a good practice if you define the function for classification/prediction/regression inside a separate python file say your_problem_name.py and import it inside app.py ( Believe me this would save a lot of time otherwise wasted in debugging)
• For the second PR, you are expected to do the above changes and provide screenshots/a small clip of the working model of the app after integrating your model from the previous PR
• For the second PR, it should be one the test branch only, later the project maintainers will merge it with the master branch for a stable release
• For PRs, related to frontend please give it to the frontend branch
• Once accepted, give a follow up PR to the test branch to render your html,css files for a page using streamlit
• As stated above you are expected to give screenshots, descriptions and other details for the PR

Entire App on Heroku: https://auto-vaidya.herokuapp.com/ Frontend on Netlify: autovaidya.netlify.app

auto_vaidya's Issues

Pneumonia Prediction

Adding Sign up/ Login page

Description

As i can see there is an requirement for login/sign up page. Therefore i would like to add the page if required.

Screenshot

Change Font Family and Improve Navbar

Currently, the font-families used aren't so exciting for the project. Use the appropriate combination to add some more flare to the project.

You can use tools like :

1. https://fontpair.co/
2. https://fonts.google.com/

After that design a new Navbar for the application, which satisfy the following requirements:

1. The navbar must need to have a white background and a box-shadow on the bottom and must stick to the top at all times.
2. Use appropriate colors (new-pallet) and set-up as CSS-Variables for people to use again.
3. The nav links on hover need to change color and add a small underline effect.
4. The navbar must be fully responsive on all screens.

quick corona test like in arogya setu

Adding a loader screen!

To give an end user immediate feedback that an application is starting and loading in the background.

Here is an example that i have implemented.

Contact Page

Brain Tumor Detection

I would like to work on the problem of predicting Brain Tumor. I will be using this dataset.

Landing Page

Pricing Page

Application is not working and just the loading screen is displayed

When running the application at live server in VS Code then the loading screen is displayed and the application does not starts.

Adding Feedback Page

Adding Feedback Page

As we know that feedback plays a very good role in knowing any loopholes or how can we improve our work.
I want to take up this issue by creating a feedback page for our project.
@smaranjitghose I want to work on this.

Adding a 404 page.

To add a 404 error page to keep a visitor on your site even if he/she hits a page that doesn't exist. Also to change the bad User experience to a positive one by adding some links to that 404 page so that the visitor can navigate to some other page.

Covid-19 Detection using Chest X-Rays

Breast Cancer Prediction

I would like to work on the problem of predicting the most common form of breast cancer (Invasive Ductal Carcinoma (IDC)). For this, I'll use breast histopathology images data.

Issue and Pr_templates

Can i work on this so that contributors have clarification for Make pr and Issues..?

Default Streamlit App

About Page

Pull request template

Create a pull request template for contributors

Add the pricing page

Hello there,
As I can see that there is a requirement for the Pricing page but no one has actually worked on the page.

So, I would love to work on page design and development. :)

Create a contributing.md

Create a contributing.md file

Heart Disease Prediction

Adding a Footer to the pages.

@anushbhatia @smaranjitghose
Please assign this to me so that i can add a common footer to all the pages.

Skin Cancer Detection

Could we add a Skin Cancer Detector as well to the project ?
We can use skin-cancer-mnist-ham10000 dataset.

Diabetic Retinopathy Detection