smsaladi / codonpair Goto Github PK
View Code? Open in Web Editor NEWA codon pair score/codon pair bias calculator
License: Other
A codon pair score/codon pair bias calculator
License: Other
Hi,
I'm trying codonpair python package. First, I installed it from pypi via pip, I got following error.
FileNotFoundError: [Errno 2] File /usr/local/var/pyenv/versions/3.7.4/lib/python3.7/site-packages/codonpair/data/ec_de3_ref.cps.tbd does not exist: '/usr/local/var/pyenv/versions/3.7.4/lib/python3.7/site-packages/codonpair/data/ec_de3_ref.cps.tbd'
Because codonpair-0.1.1.tar.gz does not contains data
directory, it does not install reference data.
x drwxrwxr-x 0 travis travis 0 2 21 2020 codonpair-0.1.1/
x drwxrwxr-x 0 travis travis 0 2 21 2020 codonpair-0.1.1/codonpair.egg-info/
x -rw-rw-r-- 0 travis travis 3636 2 21 2020 codonpair-0.1.1/codonpair.egg-info/PKG-INFO
x -rw-rw-r-- 0 travis travis 1 2 21 2020 codonpair-0.1.1/codonpair.egg-info/zip-safe
x -rw-rw-r-- 0 travis travis 1 2 21 2020 codonpair-0.1.1/codonpair.egg-info/dependency_links.txt
x -rw-rw-r-- 0 travis travis 10 2 21 2020 codonpair-0.1.1/codonpair.egg-info/top_level.txt
x -rw-rw-r-- 0 travis travis 315 2 21 2020 codonpair-0.1.1/codonpair.egg-info/SOURCES.txt
x -rw-rw-r-- 0 travis travis 23 2 21 2020 codonpair-0.1.1/codonpair.egg-info/requires.txt
x -rw-rw-r-- 0 travis travis 50 2 21 2020 codonpair-0.1.1/codonpair.egg-info/entry_points.txt
x -rw-rw-r-- 0 travis travis 3636 2 21 2020 codonpair-0.1.1/PKG-INFO
x -rw-rw-r-- 0 travis travis 2709 2 21 2020 codonpair-0.1.1/README.md
x -rw-rw-r-- 0 travis travis 38 2 21 2020 codonpair-0.1.1/setup.cfg
x drwxrwxr-x 0 travis travis 0 2 21 2020 codonpair-0.1.1/test/
x -rw-rw-r-- 0 travis travis 2452 2 21 2020 codonpair-0.1.1/test/test_regression.py
x -rw-rw-r-- 0 travis travis 917 2 21 2020 codonpair-0.1.1/setup.py
x drwxrwxr-x 0 travis travis 0 2 21 2020 codonpair-0.1.1/codonpair/
x -rw-rw-r-- 0 travis travis 9420 2 21 2020 codonpair-0.1.1/codonpair/codonpair.py
x -rw-rw-r-- 0 travis travis 66 2 21 2020 codonpair-0.1.1/codonpair/__init__.py
I've checkout the repo and build the package with python setup.py bdist_wheel
and python setup.py sdist
command. These command generated codonpair-0.1.1-py3-none-any.whl
and codonpair-0.1.1.tar.gz
contains data
dir as expected. So setup.py
does not have issues.
Could you please re-build a distribution contains data dir and publish it to pypi ?
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