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A platform that enables the visualization of individual genes for evidence of reannotation.

Home Page: https://rytenlab.com/browser/app/vizER

License: Apache License 2.0

R 40.71% R 40.71% JavaScript 18.07% Dockerfile 0.27% CSS 0.25%
omim-genes individual-genes genetic-testing vizer-platform vizer

vizer's Introduction

DOI

vizER

A platform that enables the visualisation of individual genes for evidence of reannotation.

Related publication

Incomplete annotation has a disproportionate impact on our understanding of Mendelian and complex neurogenetic disorders

David Zhang, Sebastian Guelfi, Sonia Garcia-Ruiz, Beatrice Costa, Regina H. Reynolds, Karishma D'sa, Wenfei Liu, Thomas Courtin, Amy Peterson, Andrew E. Jaffe, John Hardy, Juan A. Botía, Leonardo Collado-Torres, and Mina Ryten

SCIENCE ADVANCES, 10 Jun 2020, Vol 6, Issue 24, DOI: 10.1126/sciadv.aay8299

Description

This repository contains the User Interface (UI) code for the vizER platform.

Additionally, on the Wiki section, there is available a tutorial that fully explain the configuration needed to be able to install and expose vizER in a Linux web server environment.

Getting Started

vizER platform is fully working and can be reached following this link.

Developers

  • Sonia García-Ruiz - vizER UI developer.
  • David Zhang - vizER backend developer and first author of 'Incomplete annotation of OMIM genes is likely to be limiting the diagnostic yield of genetic testing, particularly for neurogenetic disorders'.

Acknowledgments

vizer's People

Contributors

dzhang32 avatar soniaruiz avatar

Stargazers

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Watchers

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