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matlab-image-class

Generic class for representation of 2D/3D...5D images with Matlab

matlabcytofutilities

various scripts and functions that can be useful when working with mass (or flow) cytometry data in Matlab

mcmicro

Multiple-choice microscopy pipeline

multicore-opt-sne

Parallel opt-SNE implementation with Python wrapper

napari

napari: a fast, interactive, multi-dimensional image viewer for python

napari-imc

Imaging Mass Cytometry (IMC) file type support for napari

networkpainter

Web-based software program creating and animating signaling network diagrams

neubias_academy_stardist

nichenetr

NicheNet: predict active ligand-target links between interacting cells

onesense

One-Dimensional Soli-Expression by Nonlinear Stochastic Embedding (OneSENSE) GUI for analysis of single cell data

opencyto

A package that provides data analysis pipeline for flow cytometry.

orchestratingsinglecellanalysis

Content for the OSCA Book.

ot-2-automated-barcode-pipetting

Scripts to perform automated pipetting of the 35-plex (7-choose-3) and 126-plex (9-choose-4) TOBis barcoding matrix.

pan-light

百度网盘不限速客户端, golang + qt5, 跨平台图形界面

parc

pathomicfusion

Fusing Histology and Genomics via Deep Learning - IEEE TMI

pdfkit

小工具：合并pdf、为pdf自动生成书签

peacoqc

Peak-based selection of high quality cytometry data

phate

PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.

phenocomb

An R package for combinatorial analysis of phenotypes

phenograph

Subpopulation detection in high-dimensional single-cell data

phenogrpah_pipeline

Python implementation of PhenoGraph

phenoptr

Helper functions for working with inForm data.

phenoptrreports

Create analysis reports from inForm data.

primer3

Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).

qupath-scripts

Assortment of QuPath scripts collected over the years

rapid

Risk Assessment Population and Identification

rdocumentation

R package to integrate rdocumentation.org into your R workflow

research-method

论文写作与资料分享

rphenograph

Rphenograph: R implementation of the PhenoGraph algorithm