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lncrna-annotation-nf

A Nextflow lncRNA Annotation Pipeline based on STAR, Cufflinks and FEELnc

marshalldatasolutions

mhcquant

Identify and quantify peptides from mass spectrometry raw data

mimic-code

MIMIC Code Repository: Code shared by the research community for the MIMIC-III database

mlpb

Machine Learning Problem Bible | Problem Set Here >>

msstatsqc

An R package for longitudinal system suitability monitoring and quality control for targeted proteomic experiments

nested

nextflow-vipr3

Assembly pipelines for viral NGS data, ported from snakemake version by Anreas Wilm

nf-cloud-gpu-test

Simple test Nextflow pipeline for testing GPU capabilities with cloud systems such as AWS Batch

opentrials

OpenTrials Hackathon

parserator

:bookmark: A toolkit for making domain-specific probabilistic parsers

pydata-chicago2016-ml-tutorial

Machine learning with scikit-learn tutorial at PyData Chicago 2016

rnaseq-flow

Nextflow pipeline for processing RNA-seq data

rnaseq_bybabs

Nextflow RNA-Seq Analysis Pipeline

rundeck-slack-notification

Send notifications to Slack from Rundeck

sgidspace

spew

Automatic Packaging and Distribution of Bioinformatics Pipelines

tensorflow-livelessons

"Deep Learning with TensorFlow" LiveLessons in O'Reilly Safari

tractaviewer

transmart-data

Tools for managing tranSMART's database

transurveyor

A transposition caller.

tsd

Target sequencing discovery using long reads

weather_analysis

ETL/ analysis app in Python/Postgres/Pentaho.

wehrley.github.io