Comments (1)
As currently only mentioned under Developer, you should run touch .env
in the yeast-GEM folder before using the Python functions.
I will modify the README to make this more clear.
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Related Issues (20)
- Feat: A python function for anaerobic condition setup HOT 1
- feat: KEGG pathway annotation
- feat: metSMILES annotation HOT 1
- feat: single ec-code annotation per reaction HOT 5
- feat: Uniprot annotations for all genes HOT 5
- cerevisiae with radiation simulation is possible? HOT 1
- References for anaerobic benchmarking HOT 10
- fix: add missing standard-GEM file
- some memote workflows are failing HOT 3
- Update according to genome update in 2021
- check Lys2 and Leu2 gene associations HOT 1
- Fructose transport is represented as a symporter instead of facilitated diffusion
- reaction references
- duplicate metabolites identified HOT 1
- Proposed changes to the anaerobic model HOT 2
- feat: function to report if flux vector is ΔG-compatible
- bug:spelling error for r_1024 "enxyme" HOT 2
- reactions r_0533, r_0534, r_0535 appear not balanced HOT 2
- Hardware suggestion HOT 1
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