Comments (2)
ChuanXu1
commented on June 4, 2024
@markdane, if you want to use a csv file as the input, a raw count matrix (that only contains integers) is required. If you use an AnnData as input, you need to do normalization as you have already done. So just input a csv file with raw counts without normalization in your case. Also, because your data is sparse, many informative genes in the model may not be utilized by your data
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ChuanXu1
commented on June 4, 2024
This issue should be solved. Please reopen it if you still have problem :).
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