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View Code? Open in Web Editor NEWInternal library shared by CoExpNetViz and MORPH
License: GNU Lesser General Public License v3.0
Internal library shared by CoExpNetViz and MORPH
License: GNU Lesser General Public License v3.0
In GitLab by @timdiels on Apr 3, 2019, 16:32
Column names with "
in the name, a row with fewer columns than the rest, strange line endings, trailing tabs, consecutive tabs, UTF16-LE BOM encoding, dos line endings. All these weird cases should either be supported or yield an error which tells the user exactly what's wrong and how to fix it. Plus it shouldn't look like a traceback, users don't read those because that's not how you show errors to users, that's just for devs.
So:
In GitLab by @timdiels on Apr 3, 2019, 17:51
I removed mutual inf from CoExpNetViz which erroneously used it as a correlation statistic; I do not have time to change CoExpNetViz to use mutual inf properly. This means none of our projects use it, so remove it and simplify by removing genericness too (generic df).
In GitLab by @timdiels on Apr 3, 2019, 17:55
Find an optimised vectorised pearson in a different project. If switching to YAML and no longer needing our own vectorised pearson, we may be able to get rid of this library, which simplifies things.
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