GithubHelp home page GithubHelp logo

tommyngx / chondrosarcoma Goto Github PK

View Code? Open in Web Editor NEW

This project forked from whuh-ml/chondrosarcoma

0.0 0.0 0.0 1.94 MB

Chondrosarcoma fork for learning

Python 0.14% R 0.14% Jupyter Notebook 99.72%

chondrosarcoma's Introduction

Deep learning models for predicting the survival of patients with chondrosarcoma based on a surveillance, epidemiology, and end results analysis

Data preprocessing is handled by R code: DataPreprocessing.R

Model construction, hyperparameters tuning and evaluation are handled with pysurvival, scikit-learn and lifelines packages: ModelDevelopmentWithoutTuningOutput.ipynb

Web application based on streamlit package: app.py

The original data read in R code is not provided in this repository and needs to be extracted in the SEER database according to inclusion criteria (AYA site recode 2020 Revision = 4.2 Chondrosarcoma)

To reproduce this study, first run the following codes to install packages:

git clone https://github.com/WHUH-ML/Chondrosarcoma.git
pip install -r requirements.txt

Then run ModelDevelopmentWithoutTuningOutput.ipynb in Jupyter Notebook.

Run streamlit run app.py in terminal to open the web application locally.

Online web application

Paper link

chondrosarcoma's People

Contributors

whuh-ml avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.