Topic: charmm Goto Github
Some thing interesting about charmm
Some thing interesting about charmm
charmm,A multi-purpose tool for automated setup of MD systems (e.g. for transformato) and local, menu-based rerunning of CHARMM-GUI input scripts for CHARMM
User: akaupang
Home Page: https://github.com/akaupang/macha
charmm,OFFICIAL: AnteChamber PYthon Parser interfacE
User: alanwilter
Home Page: https://alanwilter.github.io/acpype/
charmm,CodeEntropy is a python package and a collection of scripts that can be used to compute entropy using the multiscale-cell-correlation (MCC) theory from MD simulations.
User: arghya90
charmm,Membrane protein builder and parameterizer
User: eigenstate
Home Page: http://dabble.robinbetz.com
charmm,Tutorial for converting NAMD psf/pdb files to CHARMM PSF/CRD (credit attributed where appropriate to the AMAZING humans who developed these scripts)
User: fearlessroad
charmm,Perform molecular dynamics experiments (MD) with NAMD on colab
User: francescopatane96
charmm,Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run locally but allows simulations to be sent to powerful machines.
Organization: hecbiosim
Home Page: http://www.hecbiosim.ac.uk
charmm,A Package for Parametrization of Molecular Mechanics Force Fields
User: jmorado
Home Page: https://paramol.readthedocs.io
charmm,This code adds custom-made amino acids to the GROMACS forcefield directory.
User: kimjc95
charmm,Database of hand-built OPLS-AA parameters and topologies for 464 molecules. Zip files contains parameter and topologies for OpenMM, Gromacs, NAMD, CHARMM, LAMMPS, TINKER, CNS/X-PLOR, Q, DESMOND, BOSS and MCPRO.
User: leelasd
Home Page: http://traken.chem.yale.edu/ligpargen/
charmm,a python package for the interfacial analysis of molecular simulations
User: marcello-sega
Home Page: https://marcello-sega.github.io/pytim/
charmm,:skull:
User: meribold
Home Page: https://meribold.github.io/mm-paper-trail/
charmm,
User: mlnance
charmm,Framework for the rapid modeling glycans and glycoproteins.
User: tlemmin
charmm,VMD plug-in for building a peptide ab initio from backbone torsion angles or secondary structure
User: tlemmin
charmm,xBFreE is a powerful and versatile tool for computing the Binding Free Energies using a variety of methods across popular Molecular Dynamics programs
Organization: xbfreenergy
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