Topic: monarchinitiative Goto Github
Some thing interesting about monarchinitiative
Some thing interesting about monarchinitiative
monarchinitiative,Simple CLI for Blazegraph
User: balhoff
monarchinitiative,Schema and generated objects for biolink data model and upper ontology
Organization: biolink
Home Page: https://biolink.github.io/biolink-model/
monarchinitiative,EXPERIMENTAL rendering of phenopackets in linkml
User: cmungall
Home Page: https://cmungall.github.io/linkml-phenopackets/
monarchinitiative,Modular environmental exposures ontology
Organization: environmentontology
monarchinitiative,A Tool to Annotate and Prioritize Exome Variants
Organization: exomiser
Home Page: https://exomiser.readthedocs.io
monarchinitiative,Bayesian OWL ontology merging
Organization: incatools
Home Page: https://incatools.github.io/boomer/
monarchinitiative,Utility for working with DOSDP design patterns and OWL ontologies
Organization: incatools
monarchinitiative,Ontology Access Kit: A python library and command line application for working with ontologies
Organization: incatools
Home Page: https://incatools.github.io/ontology-access-kit/
monarchinitiative,An instance of KG Hub to produce a knowledge graph for COVID-19 response.
Organization: knowledge-graph-hub
Home Page: https://github.com/Knowledge-Graph-Hub/kg-covid-19/wiki
monarchinitiative,A Knowledge Graph to Illuminate the Druggable Genome
Organization: knowledge-graph-hub
Home Page: https://knowledge-graph-hub.github.io/kg-idg/
monarchinitiative,A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
Organization: knowledge-graph-hub
Home Page: https://knowledge-graph-hub.github.io/kg-obo/getting_started.html
monarchinitiative,Network Embedding All the Things
Organization: knowledge-graph-hub
monarchinitiative,Repo for generating the SRI Reference KG
Organization: knowledge-graph-hub
monarchinitiative,A format for language profiles for ontologies
Organization: monarch-initiative
Home Page: https://monarch-initiative.github.io/babelon/
monarchinitiative,LLM-driven curation assist tool (pre-alpha)
Organization: monarch-initiative
Home Page: https://monarch-initiative.github.io/curate-gpt/
monarchinitiative,Data Ingestion Pipeline for Monarch
Organization: monarch-initiative
Home Page: https://dipper.readthedocs.io/en/latest/
monarchinitiative,mining and merging disease resources
Organization: monarch-initiative
monarchinitiative,Repository for representing genotypes and their association with phenotypes
Organization: monarch-initiative
monarchinitiative,
Organization: monarch-initiative
Home Page: https://monarch-initiative.github.io/gpt-mapping-manuscript/
monarchinitiative,Perform text mining for identification of HPO terms in free text from scientific publication.
Organization: monarch-initiative
monarchinitiative,Bayes OWL Ontology Merging
Organization: monarch-initiative
monarchinitiative,Data transformation framework for LinkML data models
Organization: monarch-initiative
Home Page: https://koza.monarchinitiative.org/
monarchinitiative,Java library to map LOINC-encoded test results to Human Phenotype Ontology
Organization: monarch-initiative
Home Page: http://loinc2hpo.readthedocs.io/en/latest/
monarchinitiative,Medical action ontology
Organization: monarch-initiative
monarchinitiative,Monarch Initiative website and API
Organization: monarch-initiative
Home Page: https://monarchinitiative.org/
monarchinitiative,THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build
Organization: monarch-initiative
Home Page: https://github.com/monarch-initiative/mondo-build
monarchinitiative,Data ingest application for Monarch Initiative knowledge graph using Koza
Organization: monarch-initiative
Home Page: https://monarchinitiative.org
monarchinitiative,Monarch web application and API
Organization: monarch-initiative
monarchinitiative,The previous version of the Monarch Initiative website
Organization: monarch-initiative
Home Page: https://previous.monarchinitiative.org/
monarchinitiative,Mondo Disease Ontology
Organization: monarch-initiative
Home Page: http://obofoundry.org/ontology/mondo
monarchinitiative,LLM-based ontological extraction tools, including SPIRES
Organization: monarch-initiative
Home Page: https://monarch-initiative.github.io/ontogpt/
monarchinitiative,
Organization: monarch-initiative
Home Page: https://monarch-initiative.github.io/ontorunner/index.html
monarchinitiative,Ontology Based Profile Matching
Organization: monarch-initiative
monarchinitiative,An integrated ontology for Phenomics
Organization: monarch-initiative
Home Page: https://monarch-initiative.github.io/phenio/
monarchinitiative,The phenogrid widget
Organization: monarch-initiative
monarchinitiative,phenol: Phenotype ontology library
Organization: monarch-initiative
Home Page: https://phenol.readthedocs.io/en/latest/
monarchinitiative,PhenoteFX
Organization: monarch-initiative
Home Page: https://monarch-initiative.github.io/PhenoteFX/
monarchinitiative,A framework for empirical evaluation of phenotype matching and prioritisation
Organization: monarch-initiative
Home Page: https://monarch-initiative.github.io/pheval/
monarchinitiative,Ontology for representing scientific evidence and provenance information
Organization: monarch-initiative
monarchinitiative,A python library for calculating semantic similarity between patients in N3C
Organization: national-covid-cohort-collaborative
Home Page: https://national-covid-cohort-collaborative.github.io/semanticsimilarity/index.html
monarchinitiative,source files for OBA (Ontology of Biological Attributes)
Organization: obophenotype
Home Page: https://obophenotype.github.io/bio-attribute-ontology
monarchinitiative,An ontology of cell types
Organization: obophenotype
Home Page: https://obophenotype.github.io/cell-ontology/
monarchinitiative,Ontology for the description of human clinical features
Organization: obophenotype
Home Page: http://obophenotype.github.io/human-phenotype-ontology/
monarchinitiative,An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Organization: obophenotype
Home Page: http://obophenotype.github.io/uberon/
monarchinitiative,
Organization: phenopackets
monarchinitiative,
Organization: phenopackets
monarchinitiative,Reference java implementation for phenopackets
Organization: phenopackets
monarchinitiative,Repository for the GA4GH phenopacket schema
Organization: phenopackets
Home Page: https://phenopacket-schema.readthedocs.io/
monarchinitiative,A command line utility for operating over Phenotype eXchange Format (PXF) files.
Organization: phenopackets
monarchinitiative,loinc2hpo Annotation Data
Organization: thejacksonlaboratory
Home Page: https://github.com/monarch-initiative/loinc2hpo
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