Topic: systems-biology-simulation Goto Github
Some thing interesting about systems-biology-simulation
Some thing interesting about systems-biology-simulation
systems-biology-simulation,A Python Framework for Modeling and Analysis of Signaling Systems
Organization: biomass-dev
Home Page: http://biomass-core.rtfd.io
systems-biology-simulation,Julia interface to BioMASS
Organization: biomass-dev
Home Page: https://biomass-dev.github.io/BioMASS.jl/dev
systems-biology-simulation,DMS1401ZB Mathematical Systems Biology
User: creativequotient
systems-biology-simulation,pymCADRE enables the reconstruction of tissue-specific metabolic models in Python using transcriptomic data and information of the network topology.
Organization: draeger-lab
systems-biology-simulation,An efficient Java™ solver implementation for SBML
Organization: draeger-lab
systems-biology-simulation,The Systems Biology Simulation Core Library (SBSCL) provides an efficient and exhaustive Java implementation of methods to interpret the content of models encoded in the Systems Biology Markup Language (SBML) and its numerical solution.
Organization: draeger-lab
Home Page: https://draeger-lab.github.io/SBSCL/
systems-biology-simulation,Ecosystem of Machine-maintained Models with Automated Analysis
Organization: gyorilab
systems-biology-simulation,CyberUnits is a cross-platform class library for rapid development of high-performance computer simulations in life sciences. It supports modelling for biomedical cybernetics and systems biology with Object Pascal.
User: jwdietrich21
Home Page: http://cyberunits.sourceforge.net
systems-biology-simulation,LibSBMLSim: A library for simulating SBML models
Organization: libsbmlsim
Home Page: http://fun.bio.keio.ac.jp/software/libsbmlsim/
systems-biology-simulation,LibSBMLSim: A library for simulating SBML models (Version 2)
Organization: libsbmlsim
Home Page: https://fun.bio.keio.ac.jp/software/libsbmlsim/
systems-biology-simulation,An SBML parser written in Rust.
Organization: libsbmlsim
Home Page: https://crates.io/crates/sbml-rs
systems-biology-simulation,Simulator for SBML Models
Organization: libsbmlsim
Home Page: https://crates.io/crates/sbml-sim
systems-biology-simulation,Matlab code and data for Enzyme Cost Minimisation
User: liebermeister
systems-biology-simulation,Code and models for Flux-balance Enzyme Cost Minimization (fECM)
User: liebermeister
systems-biology-simulation,Matlab code for Metabolic Economics calculations
User: liebermeister
systems-biology-simulation,Metabolic Network Toolbox for MATLAB
User: liebermeister
systems-biology-simulation,Matlab code for resource balance analysis
User: liebermeister
systems-biology-simulation,This package simplifies evolutionary algorithms for applications in systems biology. It can be used to generate oscillating reaction networks, networks that match input timeseries data, or fit parameters (rateconstants).
User: ltatka
systems-biology-simulation,Parinsula is an interactive visual simulator of relatively isolated systems, which are a particular type of complex system.
Organization: neuraxenetica
Home Page: https://cognitivefirewall.com/parinsula/
systems-biology-simulation,A text-based computational framework for patient -specific modeling for classification of cancers. iScience (2022).
Organization: pasmopy
Home Page: https://www.cell.com/iscience/fulltext/S2589-0042(22)00214-0
systems-biology-simulation,Patient-Specific Modeling in Python
Organization: pasmopy
Home Page: https://pasmopy.readthedocs.io
systems-biology-simulation,Dynamical analysis of minimnal networks based on approximate majority algorithm (AM)
User: rosherbal
Home Page: https://github.com/rosherbal/thesis
systems-biology-simulation,Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software.
Organization: sciml
Home Page: https://docs.sciml.ai/Catalyst/stable/
systems-biology-simulation,Lecture SS 2022 - Introduction to various topics in Systems Biology
Organization: spatial-systems-biology-freiburg
systems-biology-simulation,Spatial Model Simulator with SBML Model
Organization: spatialsimulator
systems-biology-simulation,A package for researchers working with biological oscillations
Organization: yanglab-um
Home Page: https://yanglab-um.github.io/BiologicalOscillations.jl/
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