torognes / enigma

Enigma cipher tool

Hi there 👋

• 🔭 I’m working on improving the tools VSEARCH and Swarm for microbiome bioinformatics.
• 🤔 I’m often thinking about new ideas for how we can use clever algorithms and data structures to improve bioinformatics tools.
• I'm teaching the course IN4030 Introduction to bioinformatics at the University of Oslo every spring semester.
• In the fall of 2024, I'll be organizing the course IN-BIOS5000/9000 Sequencing technologies, data analysis, and applications.
• I'm also involved in various projects at Oslo University Hospital (OUS), including Publika, a publication database for OUS.

enigma's Issues

no rotor positions to output

i have decoded, but no rotor positions to output. how can i have ?

./enigma -c -u B -x 3
LBEIYRTPRXMHZWVSVBATCHBLDZFDVXTEUVRDKZFGRKTMPLINHQDUXTAVWYP
  162.4222 W: B123 R: AAA G: AAA S: BU CD EP FR IQ JY VW XZ
  171.8641 W: B123 R: AAA G: AAC S: BM CK DY EV HL NT
  179.4429 W: B123 R: AAA G: AAG S: BW CY DZ EF HK JX LV MP NO
  179.4435 W: B123 R: AAA G: AAI S: BW EY FH GX JT KP OU QS
  183.7916 W: B123 R: AAA G: AAL S: AE BR CY DO FK GX HN JQ PU SZ
  185.0199 W: B123 R: AAA G: ABQ S: AR BL CF DY EZ GN QW UV
  191.7843 W: B123 R: AAA G: ACA S: CE HP IK VW YZ
  194.8974 W: B123 R: AAA G: AIR S: DU EL FM GW IN JX KV QZ RY
  196.5305 W: B123 R: AAA G: AQT S: AK BN DU FS GZ JQ PX WY
  196.8895 W: B123 R: AAA G: ASS S: BU CK DR GW HM IL JY QX
  196.9637 W: B123 R: AAA G: AZM S: AF BW CH IQ MP OU SZ
  210.0439 W: B123 R: AAA G: BAH S: AJ BS CG FK OP QW RZ UV
  213.9919 W: B123 R: AAB G: EOX S: AY BV EL FK GU HW JP RS
  220.2416 W: B123 R: AAF G: EJF S: AW CF DV EY HX IU JK MQ NS OP
  229.1451 W: B123 R: AAX G: RRT S: AB CV GP HW IO LU MS QX TZ
  229.9481 W: B213 R: AAD G: JUS S: FJ
  235.8389 W: B213 R: AAE G: JUT S: FM
  251.8489 W: B213 R: AAF G: JUU S:
  258.2936 W: B213 R: AAG G: JUV S: FJ
  264.3030 W: B213 R: AAH G: JVW S:
  274.9000 W: B213 R: AAI G: JVX S:
  275.0850 W: B213 R: AAJ G: JVY S:
  283.3033 W: B213 R: AAK G: JVZ S:
  290.8969 W: B213 R: AAL G: JVA S:

BERLINERHABENESANDIESEMWOCHENENDESCHWERIHREZIELEZUERREICHEN

(and no option for output the partial decoded sting at each trial)