obnoxious behavior if > 500 results about tripal_blast

[ekcannon]

It's great to have more people using this module so that annoyances like this can be identified and addressed. As I wrote the code to bail if >500 results (a quick solution to a problem that was holding up a website release), I'll tackle improved handling of large results sets.

[bradfordcondon]

As I wrote the code to bail if >500 results (a quick solution to a problem that was holding up a website release), I'll tackle improved handling of large results sets.

Great and thank you! IMO This module works great and is easy to administer so I'm a big fan. I'd be happy to contribute as well.

Cheers

[bradfordcondon]

Oh i forgot the second part of this issue:

The error reads

We have provided the result files for Download at the top of this page; however, we suggest you re-submit your query using a more stringent e-value (i.e. a smaller number).

However, on my site at least, no download link is provided.

[laceysanderson]

Part of the issue with >500 results is the XML reader this module is using. It reads the entire file into memory resulting in a WSOD for large files. The solution is to switch to a stream-based XML reader as suggested in Issue #12.

The lack of download files is a simple bug however that should be easy to fix :-)

[bradfordcondon]

woops sorry for creating an issue largely duplicate with #12

embarrassing considering theres only 2 other issues lol