ummadiviany / malaria-image-classification

This repository contains code for end-term project of class Digital Image Processing & Applications taught by Prof Deboot Sheet.

Malaria-Image-Classification

The below method is successfull in classifying Malarial/Normal samples with with ~92% accuracy.

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Visualize dataset

1. Dataset can be downloaded from Malarial Cell Images Dataset.

2. Dataset consisits of 13780 parasited and 13780 non-infected images. A total of 27560 images are available in the dataset.

Some examples of the dataset are shown below.

Image class	Image 1	Image 2	Image 3	Image 4	Image 5
Parasite Image
Non Infected Image

3. Purple regions can be easily observed in the parasite images which are not available in Non-Infected images.

Classification task

Now the task is to classify the given input image into Malaria or Normal class.

Methods

Gradient-based edge dectection and morphological operations for Malaria image classification

Steps	Description	Result
1	Convert RGB to Gray Image
2	bw = Edge detection using sobel filter
3	bw005 = Edge detection using sobel filter with thresold = 0.05
4	Subtract bw from bw005
4	Dilate the bw005-bw image with structuring element of disk with radius=5
5	If the area of the dilated image is more than the threshold then, image is classified as malarial infected sample. Thresold = 100	Area = 937, So classified as Malaria .

Results

Below are results are obtained by performing classification on 13780 Malaria adn 13780 Normal class images.

Metric	Accuracy	Sensitivity	Specificity	Precision	Recall	F1-Score
Metric Value	91.97	0.929	0.910	0.912	0.929	0.920

Prediction Results

Testing on Normal-class images

Testing on Malaria-class images

Conclusions

The proposed method solves the malaria image classification problem with good accuracy. A lot of other advanced methods like use of Classifiers on top extracted feature using feature extraction and more advanced deep learning algorithms like Deep CNNs. But there is a trade-off between computaional effiecieny, time required to train & inferece. The proposed method solves the problem with least possible resources and time constraints with comparable accuracy to more sophisticated methods.

malaria-image-classification's Issues

error while running check_malaria.

am getting error while running check_malaria.Please help
Not enough input arguments.

Error in check_malaria (line
2)
grayimg = rgb2gray(img);