vallenderlab / mgap

mgap-api

This is a python wrapper around mGAP's API interface that simplifies commands and data formats.

Install

This is not available on pypi yet, but it will be in the near future.

pip install mgap-api

Features

• Create a .netrc or _netrc file.
• Retrieve mGAP datasets.
• Convert datasets/csv files to databases.
• Get basic stats about your datasets.

Examples

Maintainers

Shaurita Hutchins | @sdhutchins | ✉
Rob Gilmore | @grabear | ✉

Help

Please feel free to open an issue if you have a question/feedback/problem or submit a pull request to add a feature/refactor/etc. to this project.

mgap's Issues

Convert scripts to functions/classes

Currently, most of the code exists as a script without functions or classes.

In order to make this a package (and reproducible), classes and functions need to be written.

• Create an Mgap class to handle parsing and downloading of data as well as creation of .netrc or _netrc.
• Create utils.py for any other functions.