virtualcommons / foraging Goto Github PK

View Code? Open in Web Editor NEW

3.0 2.0 6.0 16.82 MB

Spatially explicit, multiplayer foraging experiment for studying collective action

License: MIT License

Java 99.35% HTML 0.03% Batchfile 0.07% Shell 0.02% Python 0.51% Dockerfile 0.03%

collective-action multiplayer-game java experiments social-ecological-systems

foraging's Issues

data processing pipeline

aggregate participant round data into summary files:

Round (1-60)
Block (1-3)
Growth rate (low, medium, high)
Bot type (nice, aggressive)
Date
ID (101-219)
Total number of tokens harvested by subject during the round
Total number of tokens harvested by bot during the round
Time (500-40000) when for the first time the number of tokens on the screen is 0 (if never, say 50000 so we can sort this)
Total number of tokens on the screen at the end of the round
Total number of movements by subject during the round
Total number of movements by bot during the round
Average distance between the avatars of bot and subject during the 40 seconds
SCL (average over the 40 seconds of the round)[this info is not in the game data, but where is it?)

trim whitespace on build.properties

Chris at UoL ran into an issue where trailing whitespace in server.address mucked up the config. Trim them on load:

http://stackoverflow.com/questions/38616054/ant-how-to-remove-the-leading-or-trailing-spaces-from-the-values-in-the-proper

fMRI UI changes

don't render number for single person / private property or 2 person games
change harvest animation: when issuing a harvest request, square behind the dot highlights to green. On successful harvest, overlay token onto the dot, then fade it out.
change token image to fill back square

update treatment configuration

3x3 treatment with no bot / nice bot / aggressive bot X low / medium / high growth rates
fix instructions w.r.t. payments
20 repeated rounds
expose movement / harvest probability in configuration

Key data variables:

number of tokens in the resource per second of each round (I guess this could be connected to biopack data, is this also data in seconds?)
number of tokens collected per round
number of tokens left in the resource at the end of the round

support multi-page instructions

add ability to page through multiple sections of instructions.

update archived experiment configuration files

Need to update the treatment instructions to the new StringTemplate-based format and go through updated configuration properties for an upcoming replication test.

possible classloader issue

Deployment at Carleton is unsuccessful, possibly due to OpenJDK vs Oracle JDK classloader issues:

# ant demo
...
compile:

prepare-demo:

demo:

check-configuration:

BUILD FAILED
/opt/foraging/build.xml:202: The following error occurred while executing this line:
/opt/foraging/build.xml:311: Did not find any configuration files in src/main/resources/configuration, please copy over an appropriate set of configuration files into src/main/resources/configuration

Total time: 3 seconds
# java -version
openjdk version "1.8.0_71"
OpenJDK Runtime Environment (build 1.8.0_71-b15)
OpenJDK 64-Bit Server VM (build 25.71-b15, mixed mode)

split quiz results page from instructions

For coding expedience the quiz results are shown alongside the current round instructions. Daniel would like to change this into separate screens but this would involve adding another GUI click through window for quiz results, or (better long-term) refactoring how quizzes are rendered.

Relevant code in GameWindow2D.createQuizListener

disable sanction guards

Currently costly sanctioning is only allowed if there are still resources on the board to prevent revenge sanctioning after the round is effectively over. Dan would like to disable this rule for the next set of treatments.

remove in round chat when communication is not enabled

in round chat panel is disabled but still displayed (so participants could view old chat history but not communicate further). @decarolab would like to remove it entirely so as not to distract participants

remove time remaining label from embedded TextEntryPanel

During in-round-chat, no need for duplicate time remaining label. Also the thread of execution that updates it is not being cleaned up when we manually start a round while chat is running, creating spurious time remaining data

client instructions need practice round duration before the quiz

we are asking them how long a round takes before telling them how long a round takes

Participants placed in groups of 1 (Docker, demo config files)

I've been unable to get the demo configuration files and the docker setup included in the repository to work properly. Whenever we run the facilitator and connect to it with 5 clients, each client is placed in it's own harvesting group instead of all competing on the same board. The initial practice round and questions seems to work fine.

We've tried setting clients-per-group and removing that configuration value (as 5 appears to be the default group size in the code).

I know it's loading the configuration files correctly since other changes I've tried, like board size, are reflected in the clients. Any help or advice you could provide would be really appreciated. It's entirely possible I'm misunderstanding what the demo files are supposed to produce.

token counts not updating in realtime

the token collected counts at the top right of the screen are only updating on full sync

look into xhtmlrenderer for improved CSS 2.1 support

https://github.com/flyingsaucerproject/flyingsaucer

Consider replacing JEditorPane with XHtmlPanel.setDocumentFromString

Java 8 webstart issues

Java 8 clients appear to make a separate initial request that generates an invalid stream header exception on initial socket connect - need to investigate and fix. Killing the server and restarting it pops up a notification on the client saying "Do you want to connect to x.x.x.x?". At that point if you click OK on the client, it will connect normally to the server.

Mar 21, 2015 1:09:15 PM edu.asu.commons.net.ServerSocketDispatcher processIncomingConnections
INFO: incoming connection: Socket[addr=/72.201.66.20,port=49539,localport=16001]
java.io.StreamCorruptedException: invalid stream header: 47455420
        at java.io.ObjectInputStream.readStreamHeader(ObjectInputStream.java:806)
        at java.io.ObjectInputStream.<init>(ObjectInputStream.java:299)
        at edu.asu.commons.net.SocketDispatcherWorker.<init>(SocketDispatcherWorker.java:38)
        at edu.asu.commons.net.SocketDispatcherWorker.<init>(SocketDispatcherWorker.java:42)
        at edu.asu.commons.net.ServerSocketDispatcher.processIncomingConnections(ServerSocketDispatcher.java:91)
        at edu.asu.commons.net.AbstractServerDispatcher$2.run(AbstractServerDispatcher.java:118)
Mar 21, 2015 1:09:15 PM edu.asu.commons.net.AbstractServerDispatcher$2 run
SEVERE: IO Exception while processing incoming connections: java.io.StreamCorruptedException: invalid stream header: 47455420

dust off MovieCreatorProcessor

It's likely the quick time movie processor will no longer work due to missing / aging libraries. Check if it's still functional and see if there are any viable replacements to generate movies from the data files again.

set up relative timestamps

Either look into communicating via parallel port:

http://www.oracle.com/technetwork/java/index-jsp-141752.html
https://docs.oracle.com/cd/E17802_01/products/products/javacomm/reference/api/javax/comm/ParallelPort.html

Or do a net time sync between computers and emit relative timestamps in the save file converter.

display summarized instructions after dedicated chat round

After a dedicated chat round ends display summarized instructions instead of the original round instructions

replace SocketDispatcher

https://netty.io/

http://tterm.blogspot.com/2014/03/netty-tcp-client-with-reconnect-handling.html

ostrom lab pretest

Pretest 2 participants in a group, full vision, twice as large as private property

add unique participant ids to data out and surveys

unify biopac data with data aggregation pipeline

work with Simon and Philip to unify the biopac data with the summary data

spontaneous generation

Private property round had spontaneous generation after all tokens appeared to be gone

fMRI: additional participant questions

Either use qualtrics or embed directly like the quiz

java webstart deprecated

Current JNLP setup will need to be replaced with new jlink tool

aggregate chat logs for communication analysis

Should be aggregated across the entire experiment:

Timestamp, Round, Group ID, Participant ID, Player Number, Chat Message

allow for custom round headers

Round -> Stage
Repeated Round Index -> Round

ivy is pulling too many dependencies into lib

single player optimizations

Single player version can be optimized to maintain the game state on the client and send it to the server in batches.

update bot types

rename aggressive/cooperative types to chase/nochase and add a givespace bot that values distance to the player

add communication & motives Experiment 1 configuration

update data conversion

need to update conversion scripts to take into account new variables of interest
possibly aggregate by repeated round, with a file for each repeated round and add round number to column list

split data up across pre/post resource collapse

After the last TokenCollectedEvent collapses the resource we should split up the data for pre-collapse / post-collapse:

moves
average distance to bot
SCL measures

deal with upcoming java reflection security

Will need to do something about xstream serialization, either disable it or figure out how to permit "illegal" access.

     [java] WARNING: An illegal reflective access operation has occurred
     [java] WARNING: Illegal reflective access by com.thoughtworks.xstream.core.util.Fields (file:/home/alllee/workspace/foraging/lib/xstream-1.4.10.jar) to field java.util.TreeMap.comparator
     [java] WARNING: Please consider reporting this to the maintainers of com.thoughtworks.xstream.core.util.Fields
     [java] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
     [java] WARNING: All illegal access operations will be denied in a future release

x-stream/xstream#101

foraging data processor: aggregated for bayesian analysis

emit a boolean that signifies whether a participant moved from a cell with a token on each movement event

localize payment information

needs to be added to configuration files

create dockerized deployment

Jetty + experiment server

strange SAXParseExceptions in round configuration

Super annoying bug related to the new FMRI config parameterization. Will reliably generate SAXParseExceptions whenever the 25 line is changed in source control. Changing it locally gets rid of the exception, but once it's committed it starts up again.

     [copy] Copying 150 files to /home/alllee/workspace/foraging/target/classes/conf                                                                                                                                                                                      [22/1833]
     [java] java.util.InvalidPropertiesFormatException: org.xml.sax.SAXParseException; lineNumber: 1; columnNumber: 1; Content is not allowed in prolog.
     [java]     at sun.util.xml.PlatformXmlPropertiesProvider.load(PlatformXmlPropertiesProvider.java:80)
     [java]     at java.util.Properties$XmlSupport.load(Properties.java:1201)
     [java]     at java.util.Properties.loadFromXML(Properties.java:881)
     [java]     at edu.asu.commons.conf.PropertiesConfiguration.loadProperties(PropertiesConfiguration.java:55)
     [java]     at edu.asu.commons.conf.ExperimentRoundParameters$Base.<init>(ExperimentRoundParameters.java:71)
     [java]     at edu.asu.commons.foraging.conf.RoundConfiguration.<init>(RoundConfiguration.java:146)
     [java]     at edu.asu.commons.foraging.conf.ServerConfiguration.createRoundConfiguration(ServerConfiguration.java:49)
     [java]     at edu.asu.commons.foraging.conf.ServerConfiguration.createRoundConfiguration(ServerConfiguration.java:28)
     [java]     at edu.asu.commons.conf.ExperimentConfiguration$Base.loadParameters(ExperimentConfiguration.java:181)
     [java]     at edu.asu.commons.conf.ExperimentConfiguration$Base.loadServerProperties(ExperimentConfiguration.java:170)
     [java]     at edu.asu.commons.conf.ExperimentConfiguration$Base.<init>(ExperimentConfiguration.java:150)
     [java]     at edu.asu.commons.conf.ExperimentConfiguration$Base.<init>(ExperimentConfiguration.java:137)
     [java]     at edu.asu.commons.foraging.conf.ServerConfiguration.<init>(ServerConfiguration.java:40)
     [java]     at edu.asu.commons.foraging.server.ForagingServer.<init>(ForagingServer.java:135)
     [java]     at edu.asu.commons.foraging.server.ForagingServer.main(ForagingServer.java:1181)
     [java] Caused by: org.xml.sax.SAXParseException; lineNumber: 1; columnNumber: 1; Content is not allowed in prolog.
     [java]     at com.sun.org.apache.xerces.internal.util.ErrorHandlerWrapper.createSAXParseException(ErrorHandlerWrapper.java:203)
     [java]     at com.sun.org.apache.xerces.internal.util.ErrorHandlerWrapper.fatalError(ErrorHandlerWrapper.java:177)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLErrorReporter.reportError(XMLErrorReporter.java:400)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLErrorReporter.reportError(XMLErrorReporter.java:327)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLScanner.reportFatalError(XMLScanner.java:1438)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl$PrologDriver.next(XMLDocumentScannerImpl.java:999)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(XMLDocumentScannerImpl.java:606)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(XMLDocumentFragmentScannerImpl.java:510)
     [java]     at com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:848)
     [java]     at com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:777)
     [java]     at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(XMLParser.java:141)
     [java]     at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(DOMParser.java:243)
     [java]     at com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(DocumentBuilderImpl.java:339)
     [java]     at sun.util.xml.PlatformXmlPropertiesProvider.getLoadingDoc(PlatformXmlPropertiesProvider.java:106)
     [java]     at sun.util.xml.PlatformXmlPropertiesProvider.load(PlatformXmlPropertiesProvider.java:78)
     [java]     ... 14 more
     [java] Exception in thread "main" java.lang.IllegalArgumentException: Couldn't loadFromXML using resource: conf/ and stream: java.io.ByteArrayInputStream@a09ee92
     [java]     at edu.asu.commons.conf.PropertiesConfiguration.loadProperties(PropertiesConfiguration.java:58)
     [java]     at edu.asu.commons.conf.ExperimentRoundParameters$Base.<init>(ExperimentRoundParameters.java:71)
     [java]     at edu.asu.commons.foraging.conf.RoundConfiguration.<init>(RoundConfiguration.java:146)
     [java]     at edu.asu.commons.foraging.conf.ServerConfiguration.createRoundConfiguration(ServerConfiguration.java:49)
     [java]     at edu.asu.commons.foraging.conf.ServerConfiguration.createRoundConfiguration(ServerConfiguration.java:28)
     [java]     at edu.asu.commons.conf.ExperimentConfiguration$Base.loadParameters(ExperimentConfiguration.java:181)
     [java]     at edu.asu.commons.conf.ExperimentConfiguration$Base.loadServerProperties(ExperimentConfiguration.java:170)
     [java]     at edu.asu.commons.conf.ExperimentConfiguration$Base.<init>(ExperimentConfiguration.java:150)
     [java]     at edu.asu.commons.conf.ExperimentConfiguration$Base.<init>(ExperimentConfiguration.java:137)
     [java]     at edu.asu.commons.foraging.conf.ServerConfiguration.<init>(ServerConfiguration.java:40)
     [java]     at edu.asu.commons.foraging.server.ForagingServer.<init>(ForagingServer.java:135)
     [java]     at edu.asu.commons.foraging.server.ForagingServer.main(ForagingServer.java:1181)
     [java] Caused by: java.util.InvalidPropertiesFormatException: org.xml.sax.SAXParseException; lineNumber: 1; columnNumber: 1; Content is not allowed in prolog.
     [java]     at sun.util.xml.PlatformXmlPropertiesProvider.load(PlatformXmlPropertiesProvider.java:80)
     [java]     at java.util.Properties$XmlSupport.load(Properties.java:1201)
     [java]     at java.util.Properties.loadFromXML(Properties.java:881)
     [java]     at edu.asu.commons.conf.PropertiesConfiguration.loadProperties(PropertiesConfiguration.java:55)
     [java]     ... 11 more
     [java] Caused by: org.xml.sax.SAXParseException; lineNumber: 1; columnNumber: 1; Content is not allowed in prolog.
     [java]     at com.sun.org.apache.xerces.internal.util.ErrorHandlerWrapper.createSAXParseException(ErrorHandlerWrapper.java:203)
     [java]     at com.sun.org.apache.xerces.internal.util.ErrorHandlerWrapper.fatalError(ErrorHandlerWrapper.java:177)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLErrorReporter.reportError(XMLErrorReporter.java:400)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLErrorReporter.reportError(XMLErrorReporter.java:327)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLScanner.reportFatalError(XMLScanner.java:1438)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl$PrologDriver.next(XMLDocumentScannerImpl.java:999)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(XMLDocumentScannerImpl.java:606)
     [java]     at com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(XMLDocumentFragmentScannerImpl.java:510)
     [java]     at com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:848)
     [java]     at com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:777)
     [java]     at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(XMLParser.java:141)
     [java]     at com.sun.org.apache.xerces.internal.parsers.DOMParser.parse(DOMParser.java:243)
     [java]     at com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderImpl.parse(DocumentBuilderImpl.java:339)
     [java]     at sun.util.xml.PlatformXmlPropertiesProvider.getLoadingDoc(PlatformXmlPropertiesProvider.java:106)
     [java]     at sun.util.xml.PlatformXmlPropertiesProvider.load(PlatformXmlPropertiesProvider.java:78)
     [java]     ... 14 more

chat data improvements

generate unique group numbers across the entire experiment
add sort order: date > round > group > timestamp

improve deployment + configuration

update configuration:

rename round files to stage
remove 'a' and 'n' prefixes
create ant tasks to deploy appropriate fmri config and run test server / facilitator / client

add install / run scripts for centos + ubuntu

Add a simple install script for centos for Carleton. The Docker build still has issues with older kernels / distributions.

install ant via package manager
set up nginx
create appropriate build.properties (possibly)

add new resource regeneration type and config type

Add new ResourceDispenser.Type for non-neighboring-density-dependent (still spatially explicit / overall density dependent).

Algorithm:

raw regrowth = number of trees * regrowth rate
if raw regrowth > 1, Math.max(Math.round(raw regrowth * ratio of all open spots to total spots), 1)
if 0 < raw regrowth < 1, use uniformly distributed random number to determine (e.g, 0.9 = 90% chance for new tree, 0.8 = 80% chance)

update decaro config

replace earning reductions with fines & monetary penalties rubric
make sure occupancy check is set
revert exit survey instructions change

  [java] java.lang.NullPointerException
     [java]     at edu.asu.commons.foraging.data.MovementStatisticsProcessor.process(MovementStatisticsProcessor.java:58)
     [java]     at edu.asu.commons.experiment.SaveFileProcessor$Base.process(SaveFileProcessor.java:125)
     [java]     at edu.asu.commons.experiment.SaveFileProcessor$Base.process(SaveFileProcessor.java:100)
     [java]     at edu.asu.commons.experiment.Persister.processSaveDirectory(Persister.java:241)
     [java]     at edu.asu.commons.experiment.Persister.processSaveFiles(Persister.java:215)
     [java]     at edu.asu.commons.experiment.Persister.processSaveFiles(Persister.java:220)
     [java]     at edu.asu.commons.experiment.Persister.processSaveFiles(Persister.java:220)
     [java]     at edu.asu.commons.foraging.data.ForagingSaveFileConverter.convert(ForagingSaveFileConverter.java:38)
     [java]     at edu.asu.commons.foraging.data.ForagingSaveFileConverter.main(ForagingSaveFileConverter.java:53)

bot logic improvements

when searching for a new location, don't delay after harvest
add aggressive radius for token proximity, bot makes a beeline for closest point within the aggressive radius when enabled
reduce delays, actions should be less timed
distinguish between bot-beeline and within-player-radius behavior

improve in-round chat UI

in-round chat's layout isn't effective - too small in the BorderLayout.EAST

virtualcommons / foraging Goto Github PK

foraging's Issues

Recommend Projects

Recommend Topics

Recommend Org

Jobs