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mclust

Matlab framework for spike clustering

minm1imaging

Min's paper

ndx-events

NWB extension to store event and TTL pulse data

ndx-whisk

NWB extension to store whisker tracking measurements

npmk

Neural Processing Matlab Kit is a set of functions for loading and manipulating data from Blackrock Microsystems' data files (.CCF, .NEV, .NSx).

omero-user-scripts

Plugins for OMERO

openelectrophy

Frame work for analysis intra- and extra-cellular recordings.Spike sorting.

openephys_analysis-tools

Code for analyzing data saved by the Open Ephys GUI

openephysgui

Software for electrophysiology data acquisition

openmicroscopy

OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded by private and public research grants, OME has been a major force on the international microscopy stage since 2000.

orofacial_collaboration

orofacial_pipeline

Wang lab Datajoint pipeline for orofacial experiments

p-and-a

Automatically exported from code.google.com/p/p-and-a

popanlz

population analysis

rastermap

A multi-dimensional embedding algorithm

rexdatagui

RexDataGUI: a GUI for display and analysis of REX recording files

simpleclust

Manual spike clustering software for matlab

souris

Analysis code for mouse projects

spike-sorting-hackathon

spike2scripts

Scripts for analysis of neural data in the Spike2 scripting language.

spikeextractors

Python-based module for extracting from, converting between, and curating recorded and spike sorted extracellular data from any file format.

spikeinterface

A Python-based module for creating flexible and robust spike sorting pipelines.

spikeinterface-dockerfiles

Collection of spike sorters Docker files

staged-extensions

A place to submit NWB Extensions for registration in the official NDX Catalog

tools

tridesclous

offline/online spike sorting with french touch that light the barbecue

vba-toolbox

The VBA toolbox

virt-manuscript-figures

code for figures in vIRt paper

wanglab-datajoint-pipeline

Lab multi-purpose pipeline

whisk

Fully automated tracking of single rows of whiskers in high-speed video.