wangchangsh / paraat Goto Github PK
View Code? Open in Web Editor NEWThis project forked from wonaya/paraat
This project forked from wonaya/paraat
Readme of ParaAT (Oct. 4, 2014; version 2.0) 1. Before running Please make sure the following programs are put into the global directory and can be accessible from any working directory. (1) ParaAT.pl; (2) Epal2nal.pl; (3) Multiple sequence aligner (clustalw2 | t_coffee | mafft | muscle). Sequence IDs in amino acid file, nucleotide file, and homologous group file should be the same. 2. How to run The test is on a small dataset containing 100 human-mouse orthologs. test.cds: coding sequences for human and mouse test.pep: protein sequences for human and mouse test.homologs: 100 pairs for human-mouse orthologs proc: number of processors, which is set at 6 and allowable for change during running The command to run on this dataset is: ParaAT.pl -h test.homologs -n test.cds -a test.pep -p proc -o output For help information and details parameter setting, please type: ParaAT.pl -help 3. Download & Update Please visit <http://cbb.big.ac.cn> for downloads and updates. 4. Contact information Zhang Zhang, Ph.D. CAS Key Laboratory of Genome Sciences and Information Beijing Institute of Genomics, Chinese Academy of Sciences (CAS) No.1 Beichen West Road Chaoyang District, Beijing 100101 China Email: [email protected] Tel.: +86(10)8409-7261 Fax: +86(10)8409-7845 Web: http://cbb.big.ac.cn This is a modified version! I modified the naming to fit the linux naming restrictions. 20230416
A declarative, efficient, and flexible JavaScript library for building user interfaces.
๐ Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ๐๐๐
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google โค๏ธ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.