wtsi-hgi Goto Github PK

beagle

Unofficial beagle 4.0/4.1 source code imported from http://faculty.washington.edu/browning/beagle/beagle.html

beamer-scaffold

Beamer presentation scaffold

beaver

HGI's Software Provisioning Solution

bhaps

converters from text-based haplotype matrix to binary haplotype matrix, and for sampling haplotypes into genotypes

bindmapfuse

bissell

Dummy iRobot server for client testing

bloch

BLOCH project

boto

For the latest version of boto, see https://github.com/boto/boto3 -- Python interface to Amazon Web Services

branchserve

Treeserve/Lustretree meta repository with Docker scripts to easily launch and deploy Treeserve and its interface

bridgebuilder

BridgeBuilder efficiently remaps BAM/SAM reads to a new reference by first building a "bridge" reference, first mapping to that bridge, and then remapping only a subset of reads to the full new reference.

bsub_jupyter_lab

start jupyterlab python and R server on LSF farm5 node via bsub

cache-analysis

cache-usage-simulator

capmq

Simple program to cap mapping quality in a given alignment file

chat-sharelatex

The ShareLaTeX backend chat API

clsi-sharelatex

A web api for compiling LaTeX documents in the cloud

cluster-launcher

A tool to bring up clusters launched via osdataproc. Repo found: https://github.com/wtsi-ssg/osdataproc

clusterssh

Cluster SSH - Cluster Admin Via SSH

coloc

common-workflow-language

Repository for the CWL standards. Use https://www.biostars.org/t/cwl/ for support 😊

composer

Visual and code editor for Common Workflow Language

consul-lock

CLI and Python interface for easily managing Consul locks

consul-template

Template rendering, notifier, and supervisor for @HashiCorp Consul and Vault data.

cookie-monster

COOKIES! Om nom nom nom...

cpython

The Python programming language

crispr_container

cromwell-pipelines

Cromwell pipelines for human genetic data

cromwell-setup

Our test setup for Cromwell on (and off) Google Cloud

cronic

A cure for Cron's chronic email problem

crook