xiaoruiDong/rdkit-mcp-server

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README

RDKit MCP Server

๐Ÿš€ Introducing RDKit Copilot: Agentic Access to RDKit for LLMs

๐Ÿงฐ RDKit Copilot is our new open-source MCP server that gives any LLM seamless, agent-level access to RDKit using natural language. No coding required.

๐Ÿฅ… Goal: Expose every function in RDKit 2025.3.1 through an MCP Server

๐Ÿ”— Contribute to making RDKit accessible to LLMs through an open MCP server

๐Ÿ’ฌ Contribute, test, suggest features. We are building it with you.

Installation

pip install -e .

Usage

Start server

# settings flag optional
python run_server.py --settings=settings.yaml

Start CLI client in another terminal

export OPENAI_API_KEY="sk-proj-xxx"
python run_client.py

Available Tools

# settings flag optional
python list_tools.py --settings=settings.yaml

Contributors

mjrosengrantfrederickparsons-tandemai

Issues