To install tensorflow v2.0 + python 3.7 with pacbio module environment.
bash script/install-tf/install-tensorflow-python.sh
To install tensorflow v2.0 + C++ library with pacbio module environment.
bash script/install-tf/compile-tensorflow-c++.sh
To compute mean/stdev/min/max of fextract.csv file:
fextract2stat input.fextract.csv fextract.stat.json
To standardize input fextract.csv and save as numpy compressed model:
fextract2numpy input.fextract.csv output --standardize fextract.stat.json
Train a simple multiple-normial model:
bash train_hist/lambda-multi-ccs2genome.sh