yonghuidong / ccweights

https://bcdd.shinyapps.io/CCWeights/

Hi there 👋

My name is Yonghui Dong. I am an analytical chemist. I am currently working at Weizmann Institute of Science, Israel.

My research interests include mass spectrometry imaging, metabolomics and chemoinformatics. You can find more information about me here, and my research here.

ccweights's Issues

add spinner in shiny app

Skip F test if there are not replicates

dealing with data without unknowns

CRAN manual check: ('# Not run:') as a warning

\dontrun{} should only be used if the example really cannot be executed (e.g. because of missing additional software, missing API keys, ...) by the user. That's why wrapping examples in \dontrun{} adds the comment ('# Not run:') as a warning for the user.

Use 99% confidence level for homoscedasticity test

Add a warning message when the response fall out of the linear range

remove rownames in write.csv

Add examples in R functions

rm Warning: Unknown or uninitialised column: `IS` in calibration step

Comments from reviewer

1. Add handling of missing values.
2. Add handling of points with response =0 case(s)
3. Model the variance-mean relationship

Add progress bar in evaluation section

calibration function

reverse prediction

CRAN manual check (2): add \value to .Rd files

Please add \value to .Rd files regarding exported methods and explain the functions results in the documentation. Please write about the structure of the output (class) and also what the output means. (If a function does not return a value, please document that too, e.g. \value{No return value, called for side effects} or similar)
Missing Rd-tags:
doCalibration.Rd: \value
doEvaluation.Rd: \value
doFtest.Rd: \value
doWlm.Rd: \value
runGui.Rd: \arguments, \value

CRAN manual check (3): suppress warnings in shiny app

Setting options(warn=-1) in shiny server is not allowed in CRAN. To avoid unnecessary warning output you could use e.g. suppressWarnings().

change regression curve in plolt