Shians/dorado-container

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dorado-container

Docker and Singularity container images for the Dorado basecaller.

Version Management

Version information is centralized in two files:

  • VERSION: Contains the Dorado version number (e.g., 1.1.1)
  • CHECKSUM: Contains the SHA256 checksum for the release tarball

Both container definitions (Dockerfile and dorado.def) read from these files during build, ensuring consistency across Docker and Singularity images.

Updating to a New Version

  1. Update the version in VERSION
  2. Update the SHA256 checksum in CHECKSUM
  3. Commit and push - GitHub Actions will build both images automatically

Nextflow Compatibility

The containers include procps-ng to provide the ps command required by Nextflow for task metrics collection.

Contributors

Shians

Issues