goa-ai-survey-planning's People
goa-ai-survey-planning's Issues
Inventory CTD supplies
Inventory each kit provided to the vessels, as well as the backup supply kit. If anything needs replaced, contact Nate or another GAP purchase card holder.
Special Projects
Any Special Project that has specific areas for sampling will need to be included on the ArcMap and Globe charts.
ADFG permit
Haul data OB FB final picks
Food Habits request review
Nancy Roberson will have the stomach collections request, the responsibilities here are to let the stomach lab know who the point of contact with the survey group is if they need one, and to support their request as needed.
Assess conditions
When CTD's come back from the field, assess their conditions, and make note of anything that will need to be replaced when units are sent to Seabird for calibration.
CORE request deadline
Nancy Roberson handles this.
Haul data editing
Review and add survey standards for haul, length, and specimen
Catch data editing
Special project supplies
Addition of all software on computer, ready for cloning
Megsie notes for this year and next:
- This is for all survey computers (Metis computer, wheelhouse).
- The software list includes our data collection software (Metis, Wheelhouse/Calypso, Scanmenu, Hoboware, Globe, Portfolio and more) as well peripheral softwares (e.g., BVDRconverter, SunriseSunset, Station Dropping Tool, Basket Counting Spreadsheet, etc.). Usually the peripheral software stays on the survey computers from the previous years and gets cloned, so this task just entails making sure the right versions are there and that they work as expected.
- In addition to the list of software on the Survey App, we need to make sure Metis computers have updates to GAPSurvey R package and Metis, and that there is a working version of Wildlife Computers on the wheelhouse or marport machine for importing the light data.
All computers (I think)
Metis computer
Basics
- MS Office or File format converter (docx xlsx)
- HP1006 Printer drivers - to check, go to Printers and Devices in Settings. Scroll down to Related Settings and select Print server properties. Select the Drivers tab, and see if your printer is listed. If it is, you’re all set. Sarah and I installed this on the Metis computer for cloning based on the Survey App. Need to plug into printer to complete install?
- R >= 4.3.0
- Rtools 4.3
- R Studio (latest version)
- GAPsurvey R package (latest version when it's available)
Backup CTD data and data processing
- SBE Data Processing
- SeaTerm
- SeaView
- SBE Data Processing
- Seasave
- Prolific serial driver
- Adobe Acrobat Reader
Wheelhouse computer
- HOBO Lite 3.7.8
- BVDR Converter
- Hyperterm ?? for communicating w serial devices.
- Light Meters (also Marport computer)
- Working version of Wheelhouse
- Calypso
- ArcMap with the survey area map of trawlable/untrawlable stations
- MS Office suite (Excel, Word, and Access).
- "Single file" tools like Station Dropping Tool, Net spreadsheets from Shawn, anything else?
- R >= 4.3.0
- Rtools 4.3
- R Studio (latest version)
- GAPsurvey R package (when it's available)
- Adobe Acrobat Reader
- ArcMap (?)
CTD laptop
- R >= 4.3.0
- Rtools 4.3
- R Studio (latest version)
- GAPsurvey R package (latest version when it's available)
- SBE Data Processing
- Seaterm
- Seasave
- Prolific serial driver
Marport computer
- Light Meters
- SiRFDemo (for configuring GPS thru serial port)
- CommandView
- Commander (Paul thinks Marport Server is part of Commander, but check with Gary M to make sure).
Unknown
- Network Time Sync
- DEPRECATED: Post Cruise Migration (v.20190517)
Globe computer
- Globe
- SiRFDemo
- Tides and Currents (possibly deprecated?)
ID books
Confirm that all ID guides are up to date and staged in building 8.
Assign vessels to cruises
Cruise Announcement
Other (strata lines, sea lions, etc.)
Both Globe and ArcMap files will need to be updated.
File box and forms
Electronic station log
Confirm that electronic station logs are based on correct station allocation for 2023. Electronic station log instructions can be found G:\ALEUTIAN\AI 2022\Station logs, and will need to be copied into G:\GOA\GOA 2023\Station logs folder. The folder may need to be created.
Check and update water manifold system for OEX
Manifold system should be in grey tank in Hangar 32, and will need to be inventoried before van doors close.
Protected species mitigation kit and cheat sheet
Update L-W relationship parameters
SSL zones
Instructions for dealing with conflicts on SSL rookeries are included in Files for Boats.
Leg #4
Leg #3
Calibration
RSST is responsible for calibrating the CTD's, but work with Gary to make sure the CTD's are out of housings and in their crates in preparation for sending them to Seabird. This year, the pH and DO sensors will need to be included with the crates so SeaBird can calibrate them and assemble the CTD's with them.
Database finalization
Testing Wheelhouse, new WH, and new Calypso
Chemical Request
The following chemical amounts will need to be requested from Joanna:
Ethanol: 20 gallons (Vessel 2), 20 gallons (AK Provider)
Formalin: 5 gallons (Vesssel 2), 8 gallons (AK Provider)
Otolith solution: 15 gallons (both boats)
If some special projects warrant more ethanol, then the number will need to be increased.
Pack/Load containers
At-sea supply inventory will need to be conducted prior to the doors closing.
Testing METIS
Testing METIS should be an in-person task in the future.
Update Survey Stations
Both Globe and ArcMap stations will need to be updated.
CORE call for requests
Nancy Roberson initiates this.
Environmental compliance
Standing agreement at the Center level. Not something we directly request or generate, but it needs to be included in our docs.
IPHC permit
Otolith request review
Some resources:
-
G:\SURVEY COLLECTIONS holds the otolith review requests from previous years.
-
2023 Core Collection Requests spreadsheet. Deadline for requests is 7 February 2023.
-
Repo used to evaluate feasibility of 2023 GOA and 2022 AI BTS otolith collection requests.
Establish a new survey
Leg #2
Files for boats
Inventory ES60 calibration kits
Inventory calibration kits, update the instructions, and forward to Survey App and Files For Boats teams.
Purchasing new supplies
Refer to the CTD inventory spreadsheet in the google drive for supplies that are needed.
Posters for otoliths, special projects, and species codes
Ensure that posters are previewed before they are sent to Paul Irvin in the printing office.
Old tow paths/update with R output
Both Globe and ArcMap files will need to be updated.
Review and add GIDES error checks
Heather has great documentation for how to set GIDES standards.
We do not plan on changing any LW params for GOA this year, so these should stay the same.
Subtasks:
- Figure out how to set up permissions for folks who are going to check data during the survey season (as in 2022) (Sarah and Megsie will try to do this and then tell Ned if we get stuck)
Lat-Longs to ArcGIS
Send the lat/lon station locations to Bethany and Mark
Leg #1
Net gear request
RSST gear request
Region SRP (protected spp consult first)
Suzie Teerlink at Protected Species was the contact in 2022.
Loading
The following items need to be loaded in the vans:
- CTD units in their housings
- Backup housings
- Garbage cans
- Spare kits
- Laptops
Assembly
When units come back from calibration, they will need to be assembled into the housings before the doors close on the vans. All laptops will need to be updated with new configuration files that will be included with the units when they return from calibration.
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