ahmedelsherbini / code-for-rvd-et-al.-2023

Secretory IgA impacts the microbiota density in the human nose

Secretory IgA impacts the microbiota density in the human nose

This repo is for the publication of Rv.D et al., 2023

Where to find the FASTQ sequences?

• here

What is the order of this work?

• The sequence of this work starts by going from FASTQC, MultiQC,the R script of DADA2_V1V3, the bash script of Qiime2 , the R script of phyloseq, Mia package for CST typing (HC-Kmeans-DMM) and finally the R script of IgA score

Contributing

You are welcome, please open an issue (or mail me : [email protected]) to discuss what you would like to change.

License

If this work is useful for you, kindly cite the aforementioned paper.