Comments (2)
You'll need to add the bioconda and conda-forge channels first, as described here:
https://poppunk.readthedocs.io/en/latest/installation.html#installing-with-conda-recommended
from poppunk.
I had all 3 listed.
I resolved the issue, thank you for your hep Johnlees
from poppunk.
Related Issues (20)
- databases: reference only vs all genomes HOT 1
- IndexError: list index out of range (running current `master` branch) when running `poppunk_assign` HOT 25
- Add tutorial to documentation
- Update H. flu database to new sklearn version HOT 3
- ImportError: dlopen: cannot load any more object with static TLS HOT 4
- Sketchlib back end not available? HOT 8
- extract genome assemblies from database HOT 1
- What to expect for a sample that may have a mixture of two or more strains HOT 2
- Generating jaccard distances per kmer HOT 3
- Enhancement: Assigning multiple GPSC types to mixed (meta-genome) samples HOT 2
- Zero Accessory Distances and Varied Core Distances in PopPUNK Fit Graph Analysis HOT 8
- Issue with a large Pseudomonas dataset HOT 4
- Listeria monocytogenes database is missing graph file. HOT 7
- Unable to create the group "/sketches/": (Links) Object already exists HOT 2
- Cytoscape includes strains from the entire database even with the --include-files option HOT 5
- Input reference list is misformatted HOT 10
- issues with assigning GPSCs HOT 4
- poppunk_visualise unable to find sequence in clustering HOT 2
- Versions of input databases sketches are different and the network file choice for Cytoscape visualization HOT 6
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from poppunk.