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veghp avatar veghp commented on July 25, 2024

Thanks for reporting this. The issue seems to be how your sequence editor reads the file and displays the features.
This works for me:

import dnacauldron as dc
from Bio import SeqRecord, Seq, SeqFeature
record = SeqRecord.SeqRecord(Seq.Seq("AGATCGATCGATGTAGCT"))
dc.biotools.record_operations.annotate_record(record, test=1234, number="test123")

dc.biotools.write_record(record, target="output.gb")

output.gb:

LOCUS       .                         18 bp    DNA              UNK 01-JAN-1980
DEFINITION  .
ACCESSION   <unknown id>
VERSION     <unknown id>
KEYWORDS    .
SOURCE      .
  ORGANISM  .
            .
FEATURES             Location/Qualifiers
     misc_feature    1..18
                     /test=1234
                     /number=test123
ORIGIN
        1 agatcgatcg atgtagct
//

As you see the qualifier is correct in the file, but /test is displayed under /note in an editor, SnapGene for example.

from dnacauldron.

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