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measuring properties of RNA like conservation(actually DNA) and accessibility
This project forked from asafpr/rna
measuring properties of RNA like conservation(actually DNA) and accessibility
This python module contains tools for computing RNA features such as conservation and accessibility. Conservation uses rate4site program from Tel-Aviv university (http://www.tau.ac.il/~itaymay/cp/rate4site.html) you should compile it and have it in your path, if you're working on a 64 bit system call the executable rate4site64 Accessibility uses RNAfold to compute accessibility of nuclotides along the RNA. RNAfold from the Vienna package (http://rna.tbi.univie.ac.at/) should be in your path. Accessibility can be run from command-line with the sequence as a single input
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