kdm9 Goto Github PK

kdm-snakemake-helpers

OBSOLETE: see https://github.com/kdm9/Acanthophis

kdm-tor

My UNOFFICIAL dev branch of tor. See torproject.org for the real thing

kdm801-vim

extra vim customisation

kdmrutil

khmer

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

khmer-recipes

klib

A standalone and lightweight C library

kmer-distance-workshop

kmin

A minimal hugo theme. Clean, simple, minimalist.

knitr-examples

a collection of knitr examples

knives

A pipelined quality control script that utilises the UC Davis Biocore's sabre, sickle, scythe and seqqs.

kwip

De novo estimates of genetic relatedness from next-gen sequencing data

kwip-experiments

kwip-poster

Poster on kWIP

lab-notebook

Writeups of various things

laff.jl

Julia solutions/work with the LAFF MOOC

lea

libbloom

A simple and small bloom filter implementation in plain C.

libkdm

Header-only C Library which makes life easier

libngs

The Nifty GNU Sequence Library

libqcpp

libqc++: C++11 library for next-gen sequence quality control and assessment.

libqes

A small C library, with a bioinformatic focus. Optimised for speed and a clean API

libz.jl

Fast, flexible zlib bindings.

local_pca

Methods for examining PCA locally along the genome.

logging.jl

Logging package for julia

lpipy

LPI.py: Lineage Probablity Index calculation in Python

ls2ncdu

Parser for systems which only have `ls -lR` available

macro-diffuser

A diffuser for the YN24-EX macro flash

maildir-deduplicate

:envelope: Deduplicate mails from a set of maildir folders.

make_prg

Code to create a PRG from a Multiple Sequence Alignment file