I am a bioinformatian and computational biologist analyst at the Ohio State University Microbiology Department.
My focus at the moment is in metagenomics; however, I love everything population genetics and evolutionary biology wise and may be willing to collaborate. Even if I may really wish to work on a topic with you, there is a chance I may have to decline as I can't take on more project then time allows for. If you want to do a collaboration, reach out and we can see if it is something that is in scope for my work. I will do my best to point you to resources minimally if we can't work something.
- Creation of biological workflows and automization of data processes for 'omic datasets.
- Updating the Phylogenize tool databases
- Comparing genomic architecture of the Lactobacillus family.
- The creation of a cBioPortal instance for the a project in collaboration with the Total Cancer Center
- De novo Assembly including hybrid scaffolding with optical genome mapping and 3rd generation sequencing data
- Development of data provisioning system for ingress and egress of large quantites of data (Terabytes)
- Creation of biological workflows and automization of data processes for onco-related 'omic datasets
- Development of statiscial software for BSA visualization
- Development of variant ranking packages using human population databases
- Analysis and esablishment of hybrid populations of Zea mays
- Mapping population characterization and genomic archetecture in landraces of Zea mays
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