Comments (1)
Also we need to keep in mind that we need the taxonomy to be flexible and configurable, since the taxonomy may actually represent functions or COGs (or something else) in the future.
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Related Issues (16)
- BatchQC dependency HOT 1
- Modularize code HOT 4
- Check that cached taxonomy matches with loaded reports HOT 1
- Load phyloseq object into shiny server (temporary) HOT 2
- Implement core microbiome 2D plot
- Implement core microbiome heatmap
- Remove dependency on "microbiome" HOT 5
- OTU filtering HOT 5
- Improve formatting of taxonomy table
- Implement temporal analysis and visualization tab HOT 1
- Shini not working HOT 1
- Accommodate phyloseq-class objects throughout HOT 1
- Coerce input data into phyloseq-class objects
- Distinguish between discrete and continuous variables HOT 1
- Create color scheme that can be used across modules
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from pathostat.