medphysul / delia Goto Github PK

I am trying to create a patient database using the PatientsDatabase class from the delia package. However, I am encountering an AssertionError stating that no DICOM files are found in the patient folder.

Environment:

Python version: 3.10.11
OS: Windows
Delia version: 1.2.6

Error:
AssertionError: The patient folder must contain DICOM files. This is not the case for the patient whose data is currently being downloaded since no DICOM files are found in its folder.

Code:

from delia.databases import PatientsDatabase
from delia.extractors import PatientsDataExtractor

patients_data_extractor = PatientsDataExtractor(path_to_patients_folder=r"C:\dicom_folder")
database = PatientsDatabase(path_to_database=r"C:\dicom_folder\patients_database.h5")
database.create(patients_data_extractor=patients_data_extractor, overwrite_database=True)

The folder in question does contain .dcm files, yet the program throws an AssertionError stating otherwise.